From d0be7c4b5510d43b0fdff16a51ce8ff2f2035651 Mon Sep 17 00:00:00 2001
From: Duncan Meacher <duncan.meacher@ligo.org>
Date: Sun, 15 Jul 2018 17:13:23 -0700
Subject: [PATCH] Added BNS HLV test dag + VDF
---
...NER_CLEANED_C02_O2_1164556817-23176801.xml | 864 ++++++++++++++++++
.../post_O2/Makefile.BNS_HLV_test_dag_O2 | 419 +++++++++
.../share/post_O2/Makefile.BNS_HL_test_dag_O2 | 1 -
3 files changed, 1283 insertions(+), 1 deletion(-)
create mode 100644 gstlal-inspiral/share/post_O2/H1L1V1-CBC_VETO_DEFINER_CLEANED_C02_O2_1164556817-23176801.xml
create mode 100644 gstlal-inspiral/share/post_O2/Makefile.BNS_HLV_test_dag_O2
diff --git a/gstlal-inspiral/share/post_O2/H1L1V1-CBC_VETO_DEFINER_CLEANED_C02_O2_1164556817-23176801.xml b/gstlal-inspiral/share/post_O2/H1L1V1-CBC_VETO_DEFINER_CLEANED_C02_O2_1164556817-23176801.xml
new file mode 100644
index 0000000000..7403c77e4c
--- /dev/null
+++ b/gstlal-inspiral/share/post_O2/H1L1V1-CBC_VETO_DEFINER_CLEANED_C02_O2_1164556817-23176801.xml
@@ -0,0 +1,864 @@
+<?xml version='1.0' encoding='utf-8'?>
+<!DOCTYPE LIGO_LW SYSTEM "http://ldas-sw.ligo.caltech.edu/doc/ligolwAPI/html/ligolw_dtd.txt">
+<LIGO_LW>
+ <Table Name="process:table">
+ <Column Type="lstring" Name="process:comment"/>
+ <Column Type="int_4s" Name="process:cvs_entry_time"/>
+ <Column Type="lstring" Name="process:cvs_repository"/>
+ <Column Type="lstring" Name="process:domain"/>
+ <Column Type="int_4s" Name="process:end_time"/>
+ <Column Type="lstring" Name="process:ifos"/>
+ <Column Type="int_4s" Name="process:is_online"/>
+ <Column Type="int_4s" Name="process:jobid"/>
+ <Column Type="lstring" Name="process:node"/>
+ <Column Type="ilwd:char" Name="process:process_id"/>
+ <Column Type="lstring" Name="process:program"/>
+ <Column Type="int_4s" Name="process:start_time"/>
+ <Column Type="int_4s" Name="process:unix_procid"/>
+ <Column Type="lstring" Name="process:username"/>
+ <Column Type="lstring" Name="process:version"/>
+ <Stream Delimiter="," Type="Local" Name="process:table">
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+ </Stream>
+ </Table>
+ <Table Name="process_params:table">
+ <Column Type="ilwd:char" Name="process_params:process_id"/>
+ <Column Type="lstring" Name="process_params:param"/>
+ <Column Type="lstring" Name="process_params:program"/>
+ <Column Type="lstring" Name="process_params:type"/>
+ <Column Type="lstring" Name="process_params:value"/>
+ <Stream Delimiter="," Type="Local" Name="process_params:table">
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+ "process:process_id:1","--category","ligolw-vetodef-append","int_8s","1",
+ "process:process_id:1","--comment","ligolw-vetodef-append","lstring","Missing H1 calibrated h(t) data",
+ "process:process_id:1","--skip-process-tables","ligolw-vetodef-append",,,
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+ "process:process_id:7","--end-time","ligolw-vetodef-append","int_8s","1187740818",
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+ "process:process_id:8","--category","ligolw-vetodef-append","int_8s","1",
+ "process:process_id:8","--comment","ligolw-vetodef-append","lstring","Detchar hardware injections",
+ "process:process_id:8","--skip-process-tables","ligolw-vetodef-append",,,
+ "process:process_id:8","--start-time","ligolw-vetodef-append","int_8s","1161964817",
+ "process:process_id:8","--end-pad","ligolw-vetodef-append","int_8s","16",
+ "process:process_id:8","--flag","ligolw-vetodef-append","lstring","L1:ODC-INJECTION_DETCHAR:2",
+ "process:process_id:8","--start-pad","ligolw-vetodef-append","int_8s","-16",
+ "process:process_id:8","--end-time","ligolw-vetodef-append","int_8s","1187740818",
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+ "process:process_id:9","--comment","ligolw-vetodef-append","lstring","CBC hardware injections",
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+ "process:process_id:51","--comment","ligolw-vetodef-append","lstring","ALS left unshuttered",
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+ "process:process_id:54","--comment","ligolw-vetodef-append","lstring","Periods of ETMY scattering with the 20th harmonic fringes above 30 Hz",
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+ "process:process_id:61","--category","ligolw-vetodef-append","int_8s","1",
+ "process:process_id:61","--comment","ligolw-vetodef-append","lstring","This flag removes times when the B1_PD1 photodiode saturates",
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+ "process:process_id:61","--flag","ligolw-vetodef-append","lstring","V1:DQ_B1_PD1_SATURATION:1",
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+ "process:process_id:62","--comment","ligolw-vetodef-append","lstring","This flag removes times when the B1_PD2 photodiode saturates",
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+ "process:process_id:65","--flag","ligolw-vetodef-append","lstring","V1:DQ_HREC_IS_ZERO_V1O2REPRO2A:1",
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+ "process:process_id:66","--end-pad","ligolw-vetodef-append","int_8s","0",
+ "process:process_id:66","--flag","ligolw-vetodef-append","lstring","V1:DQ_HREC_MISSING_V1O2REPRO2A:1",
+ "process:process_id:66","--start-pad","ligolw-vetodef-append","int_8s","0",
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+ "process:process_id:67","--category","ligolw-vetodef-append","int_8s","1",
+ "process:process_id:67","--comment","ligolw-vetodef-append","lstring","This flag removes times when coil drivers saturate",
+ "process:process_id:67","--skip-process-tables","ligolw-vetodef-append",,,
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+ "process:process_id:67","--end-pad","ligolw-vetodef-append","int_8s","0",
+ "process:process_id:67","--flag","ligolw-vetodef-append","lstring","V1:DQ_MAR_MIR_COIL_SATURATION:1",
+ "process:process_id:67","--start-pad","ligolw-vetodef-append","int_8s","0",
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+ "process:process_id:68","--category","ligolw-vetodef-append","int_8s","1",
+ "process:process_id:68","--comment","ligolw-vetodef-append","lstring","This flag removes the last 2 seconds of a lock segment",
+ "process:process_id:68","--skip-process-tables","ligolw-vetodef-append",,,
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+ "process:process_id:68","--end-pad","ligolw-vetodef-append","int_8s","0",
+ "process:process_id:68","--flag","ligolw-vetodef-append","lstring","V1:DQ_LOCK_LAST_02S:1",
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+ "process:process_id:69","--comment","ligolw-vetodef-append","lstring","This flag remove calibration times when the SCIENCE mode flag was still active",
+ "process:process_id:69","--skip-process-tables","ligolw-vetodef-append",,,
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+ "process:process_id:70","--category","ligolw-vetodef-append","int_8s","1",
+ "process:process_id:70","--comment","ligolw-vetodef-append","lstring","MAINSMON glitch biases TF estimation",
+ "process:process_id:70","--skip-process-tables","ligolw-vetodef-append",,,
+ "process:process_id:70","--start-time","ligolw-vetodef-append","int_8s","1165571297",
+ "process:process_id:70","--end-pad","ligolw-vetodef-append","int_8s","0",
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+ "process:process_id:71","--category","ligolw-vetodef-append","int_8s","1",
+ "process:process_id:71","--comment","ligolw-vetodef-append","lstring","CAL line glitching and biasing TF",
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+ "process:process_id:71","--segment-url","ligolw-vetodef-append","lstring","https://segments.ligo.org"
+ </Stream>
+ </Table>
+ <Table Name="veto_definer:table">
+ <Column Type="int_4s" Name="veto_definer:category"/>
+ <Column Type="lstring" Name="veto_definer:comment"/>
+ <Column Type="int_4s" Name="veto_definer:end_pad"/>
+ <Column Type="ilwd:char" Name="veto_definer:process_id"/>
+ <Column Type="lstring" Name="veto_definer:name"/>
+ <Column Type="int_4s" Name="veto_definer:version"/>
+ <Column Type="int_4s" Name="veto_definer:start_pad"/>
+ <Column Type="int_4s" Name="veto_definer:start_time"/>
+ <Column Type="lstring" Name="veto_definer:ifo"/>
+ <Column Type="int_4s" Name="veto_definer:end_time"/>
+ <Stream Delimiter="," Type="Local" Name="veto_definer:table">
+ 1,"Missing H1 calibrated h(t) data",0,"process:process_id:1","DCS-MISSING_H1_HOFT_C02",1,0,1164556817,"H1",1187740818,
+ 1,"Missing L1 calibrated h(t) data",0,"process:process_id:2","DCS-MISSING_L1_HOFT_C02",1,0,1164556817,"L1",1187740818,
+ 1,"Stochastic hardware injections",0,"process:process_id:3","ODC-INJECTION_STOCHASTIC",2,0,1161964817,"H1",1187740818,
+ 1,"Stochastic hardware injections",0,"process:process_id:4","ODC-INJECTION_STOCHASTIC",2,0,1161964817,"L1",1187740818,
+ 2,"Burst hardware injections",4,"process:process_id:5","ODC-INJECTION_BURST",2,-4,1161964817,"H1",1187740818,
+ 2,"Burst hardware injections",4,"process:process_id:6","ODC-INJECTION_BURST",2,-4,1161964817,"L1",1187740818,
+ 1,"Detchar hardware injections",16,"process:process_id:7","ODC-INJECTION_DETCHAR",2,-16,1161964817,"H1",1187740818,
+ 1,"Detchar hardware injections",16,"process:process_id:8","ODC-INJECTION_DETCHAR",2,-16,1161964817,"L1",1187740818,
+ 3,"CBC hardware injections",8,"process:process_id:9","ODC-INJECTION_CBC",2,-8,1161964817,"H1",1187740818,
+ 3,"CBC hardware injections",8,"process:process_id:10","ODC-INJECTION_CBC",2,-8,1161964817,"L1",1187740818,
+ 1,"PCALY is switching on or off",2,"process:process_id:11","DMT-PCALY_STATE_CHANGE",1,-2,1161964817,"H1",1187740818,
+ 1,"PCALY is switching on or off",2,"process:process_id:12","DMT-PCALY_STATE_CHANGE",1,-2,1161964817,"L1",1187740818,
+ 1,"High violin modes causing constant OMC DCPD saturations",0,"process:process_id:13","DCH-HIGH_VIOLINS",1,0,1164774480,"L1",1164776579,
+ 1,"Fire alarm ringing at LHO",0,"process:process_id:14","DCH-FIRE_ALARM",1,0,1167609738,"H1",1167610188,
+ 1,"Guardian computer failure",0,"process:process_id:15","DCH-GUARDIAN_FAILURE",1,0,1166414886,"L1",1166415620,
+ 1,"Severe ETMY electronics glitching",0,"process:process_id:16","DCH-ETMY_ELECTRONICS_GLITCHING",1,0,1166073446,"H1",1166208154,
+ 1,"Bad calibration due to swapped out ETMY PUM coil driver",0,"process:process_id:17","DCH-BAD_CALIBRATION_COIL_DRIVER",1,0,1166265645,"H1",1166281971,
+ 1,"Snow plow causing activity in seismic bands",0,"process:process_id:18","DCH-SNOW_PLOW",2,0,1168002018,"H1",1170892818,
+ 1,"High RMS of at least one PI mode",0,"process:process_id:19","DMT-ANY_PI_HIGH_RMS",1,0,1164556817,"H1",1187740818,
+ 1,"Remove 4 seconds at the end of each lock stretch",0,"process:process_id:20","DMT-PRE_LOCKLOSS_4",1,0,1164556817,"H1",1187740818,
+ 1,"Remove 4 seconds at the end of each lock stretch",0,"process:process_id:21","DMT-PRE_LOCKLOSS_4",1,0,1164556817,"L1",1187740818,
+ 2,"Hveto identified an RF beatnote whistle",0,"process:process_id:22","DCH-HVETO_WHISTLES",1,0,1164556817,"L1",1166557184,
+ 2,"Glitch in PSL ISS with Omicron SNR greater than 45",0,"process:process_id:23","DCH-PSL_ISS_OMICRON_SNR_GT_45",1,0,1167523218,"H1",1187740818,
+ 2,"Omicron trigger with SNR greater than 40 in HAM1 HEPI L4C",0,"process:process_id:24","DCH-HAM1_HEPI_OMICRON_GT_40",1,0,1167523218,"H1",1187740818,
+ 1,"Bad VCO Offset caused terrible whistles",0,"process:process_id:25","DCH-BAD_VCO_OFFSET",2,0,1170174018,"L1",1170283223,
+ 1,"Dramatic change in PSD after auxiliary computer reboot, LHO alog 33756",0,"process:process_id:26","DCH-COMPUTER_REBOOT",1,0,1169910318,"H1",1169913395,
+ 2,"Overflows in ETMX L2 UL",1,"process:process_id:29","DCH-ETMX_L2_UL_DAC_OVERFLOW",1,-1,1170174018,"H1",1185217218,
+ 2,"Severe extended time of noise in HAM1 HEPI L4C",0,"process:process_id:30","DCH-SEVERE_HAM1_HEPI_OMICRON_GT_40",1,0,1171861200,"H1",1171861650,
+ 2,"ETMY L3 OPLEV SUM glitching, coupling into h(t)",0,"process:process_id:31","DCH-ETMY_L3_OPLEV_BLRMS_GT65",2,0,1171632618,"H1",1187740818,
+ 1,"Severe scattering due to high microseism",0,"process:process_id:32","DCH-SEVERE_SCATTERING",1,0,1173297618,"L1",1173312111,
+ 2,"Glitches seen in ETMX MAINSMON channels, coupling into h(t)",0,"process:process_id:33","DCH-ETMX_MAINSMON_BL_GT_30",1,0,1171632618,"H1",1187740818,
+ 1,"Severe RF45 glitching",0,"process:process_id:34","DCH-RF45_SEVERE_GLITCHING",2,0,1174276735,"H1",1174312020,
+ 1,"High violin modes causing constant OMC DCPD saturations",0,"process:process_id:36","DCH-HIGH_VIOLINS",1,0,1174184899,"H1",1185609178,
+ 2,"ITMY STS2 Z BLRMS greater than 600",0,"process:process_id:37","DCH-ITMY_STS2_Z_BLRMS_GT_600",1,0,1174649000,"H1",1175356818,
+ 2,"Power glitches related to EX chiller switch",0,"process:process_id:38","DCH-EX_MAG_OMICRON_GT_400",1,0,1175356818,"L1",1176240318,
+ 2,"Glitch in ETMX L3 OPLEV laser",0,"process:process_id:39","DCH-ETMX_L3_OPLEV_SUM_HIGH_BLRMS",1,0,1175356818,"H1",1187740818,
+ 1,"Malfunctioning ITMY OPLEV, see LHO alog 35378",0,"process:process_id:40","DCH-BROKEN_ITMY_OPLEV",1,0,1175356818,"H1",1176240318,
+ 2,"EY PLUSY microphone 30-200Hz BLRMS GT 200",0,"process:process_id:41","DCH-EY_MIC_BLRMS_GT_200",1,0,1176240318,"L1",1187740818,
+ 2,"CS YMANSPOOL microphone 30-200Hz BLRMS GT 250",0,"process:process_id:42","DCH-CS_MIC_BLRMS_GT_250",1,0,1176240318,"L1",1187740818,
+ 2,"Periods of ETMY scattering with fringes above 25 Hz",0,"process:process_id:43","DCH-ETMY_SCATTERING_GT_25HZ",1,0,1176240318,"L1",1181845818,
+ 1,"Severe thunderstorm at LLO",0,"process:process_id:44","DCH-SEVERE_THUNDERSTORM",1,0,1177859718,"L1",1177877718,
+ 2,"Periods of PRM scattering with fringes above 40 Hz",0,"process:process_id:45","DCH-PRM_SCATTERING_GT_40HZ",1,0,1176955218,"H1",1181845818,
+ 2,"Ringing after DAC overflow of ITMX R0 actuators",0,"process:process_id:46","DCH-ITMX_R0_OVERFLOW",1,0,1176955218,"H1",1178294418,
+ 2,"Glitching in the EX SUSRACK between 10-50Hz coupling in to h(t)",0,"process:process_id:47","DCH-EX_MAG_EBAY_SUSRACK_GLITCHING",1,0,1178294418,"H1",1182825018,
+ 2,"Earthquakes causing glitching in h(t), BLRMS of the CS Z gt 320nm/s",0,"process:process_id:48","DCH-EARTHQUAKE_CS_Z_BLRMS_GT_320",2,0,1178294418,"H1",1187740818,
+ 2,"Earthquakes causing glitching in h(t), BLRMS of the CS Z gt 190nm/s",0,"process:process_id:49","DCH-EARTHQUAKE_CS_Z_BLRMS_GT_190",2,0,1178294418,"L1",1187740818,
+ 1,"RF45 AM stabilization issues",0,"process:process_id:50","DCH-RF45_AM_STABILIZATION",5,0,1178294418,"H1",1187740818,
+ 1,"ALS left unshuttered",0,"process:process_id:51","DCH-ALS_UNSHUTTERED",1,0,1180911618,"H1",1181059218,
+ 1,"LVEA and EX/EY excursions",0,"process:process_id:52","DCH-LVEA_EX_EY_EXCURSIONS",1,0,1180911618,"H1",1181059218,
+ 2,"Glitching in the EX SUSRACK between 10-50Hz coupling in to h(t). This flag looks at locked times",0,"process:process_id:53","DCH-EX_MAG_EBAY_SUSRACK_GLITCHING_GRD_ISC_LOCK_NOMINAL",1,0,1180911618,"H1",1181059218,
+ 2,"Periods of ETMY scattering with the 20th harmonic fringes above 30 Hz",0,"process:process_id:54","DCH-ETMY_SCATTERING_GT_30HZ",1,0,1181845818,"H1",1187740818,
+ 1,"Not in O2 standard configuration, calibration is suspect",0,"process:process_id:55","DCH-CAL_NON_O2_STANDARD_CONFIG",1,0,1184217858,"H1",1184439498,
+ 2,"Gating times from FEC models 88, 98, 8 and 30 which are greater than 3s in width",0,"process:process_id:56","DCH-GATES_GT_3SEC",1,0,1163203217,"H1",1187740818,
+ 2,"Gating times from FEC models 88, 98 and 8 which are greater than 3s in width",0,"process:process_id:57","DCH-GATES_GT_3SEC",1,0,1163203217,"L1",1187740818,
+ 1,"This flag removes times when the B1_PD1 photodiode saturates",0,"process:process_id:61","DQ_B1_PD1_SATURATION",1,0,1185616818,"V1",1187733618,
+ 1,"This flag removes times when the B1_PD2 photodiode saturates",0,"process:process_id:62","DQ_B1_PD2_SATURATION",1,0,1185616818,"V1",1187733618,
+ 1,"This flag removes times when the trigger rate measured by Omicron in the DARM channel is above 10000 Hz",0,"process:process_id:63","DQ_OMICRON_DARM_RATE_10000",1,0,1185616818,"V1",1187733618,
+ 1,"This flag removes times when the reprocessed h(t) reconstruction failed",0,"process:process_id:64","DQ_HREC_BAD_QUALITY_V1O2REPRO2A",1,0,1185616818,"V1",1187733618,
+ 1,"This flag removes times when reprocessed h(t) is zero",0,"process:process_id:65","DQ_HREC_IS_ZERO_V1O2REPRO2A",1,0,1185616818,"V1",1187733618,
+ 1,"This flag removes times when reprocessed h(t) is missing",0,"process:process_id:66","DQ_HREC_MISSING_V1O2REPRO2A",1,0,1185616818,"V1",1187733618,
+ 1,"This flag removes times when coil drivers saturate",0,"process:process_id:67","DQ_MAR_MIR_COIL_SATURATION",1,0,1185616818,"V1",1187733618,
+ 1,"This flag removes the last 2 seconds of a lock segment",0,"process:process_id:68","DQ_LOCK_LAST_02S",1,0,1185616818,"V1",1187733618,
+ 1,"This flag remove calibration times when the SCIENCE mode flag was still active",0,"process:process_id:69","DQ_CALIBRATION_MODE",1,0,1185616818,"V1",1187733618,
+ 1,"MAINSMON glitch biases TF estimation",0,"process:process_id:70","DCH-LOUD_MAINSMON_GLITCH",1,0,1165571297,"L1",1165572017,
+ 1,"CAL line glitching and biasing TF",0,"process:process_id:71","DCH-CAL_LINE_GLITCH",2,0,1164556817,"H1",1187740818
+ </Stream>
+ </Table>
+</LIGO_LW>
diff --git a/gstlal-inspiral/share/post_O2/Makefile.BNS_HLV_test_dag_O2 b/gstlal-inspiral/share/post_O2/Makefile.BNS_HLV_test_dag_O2
new file mode 100644
index 0000000000..aee9d75442
--- /dev/null
+++ b/gstlal-inspiral/share/post_O2/Makefile.BNS_HLV_test_dag_O2
@@ -0,0 +1,419 @@
+# condor commands
+# Set the accounting tag from https://ldas-gridmon.ligo.caltech.edu/ldg_accounting/user
+ACCOUNTING_TAG=ligo.prod.o2.cbc.uber.gstlaloffline
+GROUP_USER=
+CONDOR_COMMANDS:=--condor-command=accounting_group=$(ACCOUNTING_TAG) --condor-command=accounting_group_user=$(GROUP_USER)
+
+############################
+# Template bank parameters #
+############################
+
+# Note that these can can change if you modify the template bank program.
+# Waveform approximant
+APPROXIMANT = TaylorF2
+# Minimum component mass for the template bank
+MIN_MASS = 0.99
+# Maximum component mass for the template bank
+MAX_MASS = 3.1
+# Minimum total mass for the template bank
+MIN_TOTAL_MASS = 1.98
+# Maximum total mass for the template bank
+MAX_TOTAL_MASS = 6.2
+# Maximum symmetric mass ratio for the template bank
+MAX_ETA = 0.25
+# Minimum symmetric mass ratio for the template bank
+MIN_ETA = 0.18
+# Low frequency cut off for the template bank placement
+LOW_FREQUENCY_CUTOFF = 15.0
+# High pass frequency to condition the data before measuring the psd for template placement
+HIGH_PASS_FREQ = 10.0
+# Highest frequency at which to compute the metric
+HIGH_FREQUENCY_CUTOFF = 1024.0
+# The sample rate at which to compute the template bank
+SAMPLE_RATE = 4096
+# The minimal match of the template bank; determines how much SNR is retained for signals "in between the bank points"
+MM = 0.975
+# The start time for reading the data for the bank
+BANKSTART = 1187000000
+# The stop time for reading the data for the bank (Bank start + 2048s)
+BANKSTOP = 1187002048
+
+# Controls the number of templates in each SVD sub bank
+NUM_SPLIT_TEMPLATES = 200
+# Number of bins of chi to uniformly bin templates into
+NUM_CHI_BINS = 1
+# Controls the overlap from sub bank to sub bank - helps mitigate edge effects
+# in the SVD. Redundant templates will be removed
+OVERLAP = 30
+# The approximant that you wish to filter with for BANK_MCHIRP1 and BANK_MCHIRP2, respectively.
+MCHIRP_SPLIT = 1.73
+APPROXIMANT1 = 0.00:$(MCHIRP_SPLIT):TaylorF2
+APPROXIMANT2 = $(MCHIRP_SPLIT):1000.0:SEOBNRv4_ROM
+
+#########################
+# Triggering parameters #
+#########################
+
+# The detectors to analyze
+IFOS = H1 L1 V1
+# Minimum number of detecors working to use
+MIN_IFOS = 2
+# The GPS start time for analysis
+START = 1187000000
+# The GPS end time for analysis
+STOP = 1187100000
+# A user tag for the run
+TAG = BNS_test_dag
+# Run number
+RUN=run_1
+# A web directory for output
+# cit & uwm
+WEBDIR = ~/public_html/testing/$(TAG)/$(START)-$(STOP)-$(RUN)
+# Atlas
+#WEBDIR = ~/WWW/LSC/testing/$(TAG)/$(START)-$(STOP)-test_dag-$(RUN)
+# The number of sub banks in each SVD bank file
+NUMBANKS = 5
+# The control peak time for the composite detection statistic. If set to 0 the
+# statistic is disabled
+PEAK = 0
+# The length of autocorrelation chi-squared in sample points
+AC_LENGTH = 351
+# The minimum number of samples to include in a given time slice
+SAMPLES_MIN = 2048
+# The maximum number of samples to include in the 256 Hz or above time slices
+SAMPLES_MAX_256 = 2048
+
+#############################
+# additional options, e.g., #
+#############################
+
+#ADDITIONAL_DAG_OPTIONS = "--samples-min $(SAMPLES_MIN) --samples-max-256 $(SAMPLES_MAX_256) --blind-injections BNS-MDC1-WIDE.xml"
+ADDITIONAL_DAG_OPTIONS:=--samples-min $(SAMPLES_MIN) --samples-max-256 $(SAMPLES_MAX_256)
+
+##############
+# Injections #
+##############
+
+# Change as appropriate, whitespace is important
+MCHIRP_INJECTIONS := 0.5:100.0:1_injections.xml
+# Maximum injection distance in Mpc
+INJ_MAX_DIST = 500
+# Minimum component mass 1 for injections
+INJ_MIN_MASS1 = 1.35
+# Maximum component mass 1 for injections
+INJ_MAX_MASS1 = 1.45
+# Minimum component mass 2 for injections
+INJ_MIN_MASS2 = 1.35
+# Maximum component mass 2 for injections
+INJ_MAX_MASS2 = 1.45
+# Mean component mass 1 for injections
+INJ_MEAN_MASS1 = 1.4
+# Mean component mass 2 for injections
+INJ_MEAN_MASS2 = 1.4
+# Standard dev component mass 1 for injections
+INJ_STD_MASS1 = 0.01
+# Standard dev component mass 2 for injections
+INJ_STD_MASS2 = 0.01
+# Minimum total mass for injections
+INJ_MIN_TOTAL_MASS = 2.7
+# Maximum total mass for injections
+INJ_MAX_TOTAL_MASS = 2.9
+# minimum frequency for injections. NOTE this should be lower than the intended filtering frequency
+INJ_FLOW = 25
+# Injection distances
+INJ_MIN_DIST = 20000
+INJ_MAX_DIST = 200000
+
+#######################
+# GSTLAL VETO Options #
+#######################
+
+# Vetoes file names
+VETODEF = /path/to/H1L1V1-CBC_VETO_DEFINER_CLEANED_C02_O2_1164556817-23176801.xml
+
+vetoes_suffix := _vetoes.xml
+VETOES_FILES := $(addsuffix $(vetoes_suffix),$(IFOS))
+
+CAT1_vetoes_suffix := _CAT1_vetoes.xml
+CAT1_VETOES_FILES := $(addsuffix $(CAT1_vetoes_suffix),$(IFOS))
+
+###############################
+# Segment and frame type info #
+###############################
+
+# Info from https://wiki.ligo.org/viewauth/LSC/JRPComm/ObsRun2
+# GSTLAL_SEGMENTS Options
+SEG_SERVER=https://segments.ligo.org
+# C00
+#LIGO_SEGMENTS="$*:DMT-ANALYSIS_READY:1"
+# C01
+#LIGO_SEGMENTS="$*:DCS-ANALYSIS_READY_C01:1"
+# C02
+LIGO_SEGMENTS="$*:DCH-CLEAN_SCIENCE_C02:1"
+VIRGO_SEGMENTS="V1:ITF_SCIENCE"
+
+SEGMENT_TRIM = 0
+SEGMENT_MIN_LENGTH = 512
+
+# The LIGO frame types
+# C00
+#HANFORD_FRAME_TYPE='H1_HOFT_C00'
+#LIVINGSTON_FRAME_TYPE='L1_HOFT_C00'
+# C01
+#HANFORD_FRAME_TYPE='H1_HOFT_C01'
+#LIVINGSTON_FRAME_TYPE='L1_HOFT_C01'
+# C02
+HANFORD_FRAME_TYPE='H1_CLEANED_HOFT_C02'
+LIVINGSTON_FRAME_TYPE='L1_CLEANED_HOFT_C02'
+VIRGO_FRAME_TYPE='V1O2Repro2A'
+
+# The Channel names. FIXME sadly you have to change the CHANNEL_NAMES string if
+# you want to analyze a different set of IFOS
+# C00
+#H1_CHANNEL=GDS-CALIB_STRAIN
+#L1_CHANNEL=GDS-CALIB_STRAIN
+# C01
+#H1_CHANNEL=DCS-CALIB_STRAIN_C01
+#L1_CHANNEL=DCS-CALIB_STRAIN_C01
+# C02
+H1_CHANNEL=DCH-CLEAN_STRAIN_C02
+L1_CHANNEL=DCH-CLEAN_STRAIN_C02
+V1_CHANNEL=Hrec_hoft_V1O2Repro2A_16384Hz
+
+CHANNEL_NAMES:=--channel-name=H1=$(H1_CHANNEL) --channel-name=L1=$(L1_CHANNEL) --channel-name=V1=$(V1_CHANNEL)
+
+###################################################################################
+# Get some basic definitions. NOTE this comes from the share directory probably. #
+###################################################################################
+
+include /path/to/Makefile.offline_analysis_rules
+
+# FIXME Is there a way to put this back in offline analysis rules?
+BANK_CACHE_STRING:=H1=H1_split_bank.cache,L1=L1_split_bank.cache,V1=V1_split_bank.cache
+BANK_CACHE_FILES:=H1_split_bank.cache L1_split_bank.cache V1_split_bank.cache
+# the point of this is to build the string e.g. H1=../bank/H1_bank.cache,L1=../bank/L1_bank.cache
+
+
+############
+# Workflow #
+############
+
+all : dag SNR_sed
+ @echo "Submit with: condor_submit_dag trigger_pipe.dag"
+ @echo "Monitor with: tail -f trigger_pipe.dag.dagman.out | grep -v -e ULOG -e monitoring"
+
+SNR_sed : dag
+ sed -i 's@environment = GST_REGISTRY_UPDATE=no;@environment = "GST_REGISTRY_UPDATE=no LD_PRELOAD=$(MKLROOT)/lib/intel64/libmkl_core.so"@g' gstlal_inspiral_injection_snr.sub
+
+# Run inspiral pipe to produce dag
+dag : segments.xml.gz vetoes.xml.gz frame.cache inj_tisi.xml tisi.xml plots $(WEBDIR) $(INJECTIONS) $(BANK_CACHE_FILES)
+ gstlal_inspiral_pipe \
+ --data-source frames \
+ --gps-start-time $(START) \
+ --gps-end-time $(STOP) \
+ --frame-cache frame.cache \
+ --frame-segments-file segments.xml.gz \
+ --vetoes vetoes.xml.gz \
+ --frame-segments-name datasegments \
+ --control-peak-time $(PEAK) \
+ --template-bank H1-TMPLTBANK-$(START)-2048.xml \
+ --num-banks $(NUMBANKS) \
+ --fir-stride 1 \
+ --web-dir $(WEBDIR) \
+ --time-slide-file tisi.xml \
+ --inj-time-slide-file inj_tisi.xml \
+ $(INJECTION_LIST) \
+ --bank-cache $(BANK_CACHE_STRING) \
+ --tolerance 0.9999 \
+ --overlap $(OVERLAP) \
+ --flow $(LOW_FREQUENCY_CUTOFF) \
+ $(CHANNEL_NAMES) \
+ --autocorrelation-length $(AC_LENGTH) \
+ $(ADDITIONAL_DAG_OPTIONS) \
+ $(CONDOR_COMMANDS) \
+ --ht-gate-threshold-linear 0.8:15.0-45.0:100.0 \
+ --request-cpu 2 \
+ --request-memory 5GB \
+ --min-instruments $(MIN_IFOS) \
+ --ranking-stat-samples 4194304
+ sed -i '1s/^/JOBSTATE_LOG logs\/trigger_pipe.jobstate.log\n/' trigger_pipe.dag
+
+# sed -i "/^environment/s?\$$?GSTLAL_FIR_WHITEN=0;?" *.sub # Set GSTLAL_FIR_WHITEN within sub files
+# sed -i 's/.*queue.*/Requirements = regexp("Intel.*v[3-5]", TARGET.cpuinfo_model_name)\n&/' *.sub
+# Following three lines are use to make dynamical memory requests.
+# sed -i 's/.*request_memory.*/#&\n+MemoryUsage = ( 2048 ) * 2 \/ 3\nrequest_memory = ( MemoryUsage ) * 3 \/ 2\nperiodic_hold = ( MemoryUsage >= ( ( RequestMemory ) * 3 \/ 2 ) )\nperiodic_release = (JobStatus == 5) \&\& ((CurrentTime - EnteredCurrentStatus) > 180) \&\& (HoldReasonCode != 34)/' *.sub
+# sed -e 's@+MemoryUsage = ( 2048 ) \* 2 / 3@+MemoryUsage = ( 6000 ) \* 2 / 3@' gstlal_inspiral.sub
+# sed -e 's@+MemoryUsage = ( 2048 ) \* 2 / 3@+MemoryUsage = ( 6000 ) \* 2 / 3@' gstlal_inspiral_inj.sub
+
+%_split_bank.cache : H1-TMPLTBANK-$(START)-2048.xml
+ mkdir -p $*_split_bank
+ gstlal_bank_splitter \
+ --f-low $(LOW_FREQUENCY_CUTOFF) \
+ --group-by-chi $(NUM_CHI_BINS) \
+ --output-path $*_split_bank \
+ --approximant $(APPROXIMANT1) \
+ --approximant $(APPROXIMANT2) \
+ --output-cache $@ \
+ --overlap $(OVERLAP) \
+ --instrument $* \
+ --n $(NUM_SPLIT_TEMPLATES) \
+ --sort-by mchirp \
+ --max-f-final $(HIGH_FREQUENCY_CUTOFF) \
+ --write-svd-caches \
+ --num-banks $(NUMBANKS) \
+ $<
+
+# FIXME Update lalapps_tmpltbank to lalapps_cbc_sbank
+H1-TMPLTBANK-$(START)-2048.xml: H1_frame.cache
+ lalapps_tmpltbank \
+ --disable-compute-moments \
+ --grid-spacing Hexagonal \
+ --dynamic-range-exponent 69.0 \
+ --enable-high-pass $(HIGH_PASS_FREQ) \
+ --high-pass-order 8 \
+ --strain-high-pass-order 8 \
+ --minimum-mass $(MIN_MASS) \
+ --maximum-mass $(MAX_MASS) \
+ --min-total-mass $(MIN_TOTAL_MASS) \
+ --max-total-mass $(MAX_TOTAL_MASS) \
+ --max-eta $(MAX_ETA) \
+ --min-eta $(MIN_ETA) \
+ --gps-start-time $(BANKSTART) \
+ --gps-end-time $(BANKSTOP) \
+ --calibrated-data real_8 \
+ --channel-name H1:$(H1_CHANNEL) \
+ --space Tau0Tau3 \
+ --number-of-segments 15 \
+ --minimal-match $(MM) \
+ --high-pass-attenuation 0.1 \
+ --min-high-freq-cutoff ERD \
+ --segment-length 1048576 \
+ --low-frequency-cutoff $(LOW_FREQUENCY_CUTOFF) \
+ --pad-data 8 \
+ --num-freq-cutoffs 1 \
+ --sample-rate $(SAMPLE_RATE) \
+ --high-frequency-cutoff $(HIGH_FREQUENCY_CUTOFF) \
+ --resample-filter ldas \
+ --strain-high-pass-atten 0.1 \
+ --strain-high-pass-freq $(HIGH_PASS_FREQ) \
+ --frame-cache H1_frame.cache \
+ --max-high-freq-cutoff ERD \
+ --approximant $(APPROXIMANT) \
+ --order twoPN \
+ --spectrum-type median \
+ --verbose
+
+1_injections.xml :
+ lalapps_inspinj \
+ --m-distr gaussian \
+ --min-mass1 $(INJ_MIN_MASS1) \
+ --max-mass1 $(INJ_MAX_MASS1) \
+ --min-mass2 $(INJ_MIN_MASS2) \
+ --max-mass2 $(INJ_MAX_MASS2) \
+ --min-mtotal $(INJ_MIN_TOTAL_MASS) \
+ --max-mtotal $(INJ_MAX_TOTAL_MASS) \
+ --mean-mass1 $(INJ_MEAN_MASS1) \
+ --mean-mass2 $(INJ_MEAN_MASS2) \
+ --stdev-mass1 $(INJ_STD_MASS1) \
+ --stdev-mass2 $(INJ_STD_MASS2) \
+ --gps-start-time $(START) \
+ --gps-end-time $(STOP) \
+ --disable-spin \
+ --d-distr uniform \
+ --i-distr uniform \
+ --min-distance $(INJ_MIN_DIST) \
+ --max-distance $(INJ_MAX_DIST) \
+ --waveform TaylorT4threePointFivePN \
+ --l-distr random \
+ --f-lower $(INJ_FLOW) \
+ --time-step 20 \
+ --t-distr uniform \
+ --time-interval 3 \
+ --seed 51056 \
+ --output $@
+
+# Produce time slides file
+tisi.xml : inj_tisi.xml
+ lalapps_gen_timeslides --instrument=H1=0:0:0 --instrument=L1=25.13274:25.13274:25.13274 --instrument=V1=12.345:12.345:12.345 bg_tisi.xml
+ ligolw_add --output $@ bg_tisi.xml $<
+
+# Produce injection time slide file
+inj_tisi.xml :
+ lalapps_gen_timeslides --instrument=H1=0:0:0 --instrument=L1=0:0:0 --instrument=V1=0:0:0 $@
+
+# Produce veto file
+vetoes.xml.gz : $(VETOES_FILES)
+ ligolw_add --output $@ $(VETOES_FILES)
+ ligolw_cut --delete-column segment:segment_def_cdb --delete-column segment:creator_db --delete-column segment_definer:insertion_time $@
+ gzip $@
+
+%_vetoes.xml : $(VETODEF) lauras_txt_files_to_xml H1-GATES-1163203217-24537601.txt L1-GATES-1163203217-24537601.txt
+ touch V1-GATES-1163203217-24537601.txt
+ ./lauras_txt_files_to_xml -i $* -c -o $*-gates.xml $*-GATES-1163203217-24537601.txt
+ gstlal_segments_operations --union --segment-name VETO_CAT3_CUMULATIVE --output-file $@.tmp --output-segment-name vetoes $*-VETOTIME_CAT3-*.xml $*-VETOTIME_CAT3-*.xml
+ gstlal_segments_operations --union --segment-name vetoes --output-file $@ --output-segment-name vetoes $@.tmp $*-gates.xml
+
+# Produce segments file
+segments.xml.gz : $(SEGMENTS_FILES) frame.cache CAT1_vetoes.xml.gz
+ ligolw_add --output segdb.xml $(SEGMENTS_FILES)
+ ligolw_cut --delete-column segment:segment_def_cdb --delete-column segment:creator_db --delete-column segment_definer:insertion_time segdb.xml
+ gstlal_segments_operations --diff --output-file $@ segdb.xml CAT1_vetoes.xml.gz
+ gstlal_segments_trim --trim $(SEGMENT_TRIM) --gps-start-time $(START) --gps-end-time $(STOP) --min-length $(SEGMENT_MIN_LENGTH) --output $@ $@
+
+# Produce CAT1 veto file
+CAT1_vetoes.xml.gz : $(CAT1_VETOES_FILES)
+ ligolw_add --output $@ $(CAT1_VETOES_FILES)
+ ligolw_cut --delete-column segment:segment_def_cdb --delete-column segment:creator_db --delete-column segment_definer:insertion_time $@
+ gzip $@
+
+%_CAT1_vetoes.xml : $(VETODEF)
+ ligolw_segments_from_cats_dqsegdb --segment-url=$(SEG_SERVER) --veto-file=$(VETODEF) --gps-start-time $(START) --gps-end-time $(STOP) --cumulative-categories
+ gstlal_segments_operations --union --segment-name VETO_CAT1_CUMULATIVE --output-file $@ --output-segment-name datasegments $*-VETOTIME_CAT1-*.xml $*-VETOTIME_CAT1-*.xml
+
+# Produce frame cache files
+frame.cache : $(FRAME_CACHE_FILES)
+ cat $(FRAME_CACHE_FILES) > frame.cache
+ # FIXME since these frame types were made incorrectly, make sure ligolw_path_to_cache reads ifo names properly
+ sed -i s/H\ $(LIGO_FRAME_TYPE)/H\ H1_$(LIGO_FRAME_TYPE)/g frame.cache
+ sed -i s/L\ $(LIGO_FRAME_TYPE)/L\ L1_$(LIGO_FRAME_TYPE)/g frame.cache
+ sed -i s/V\ $(LIGO_FRAME_TYPE)/V\ V1_$(LIGO_FRAME_TYPE)/g frame.cache
+
+H1_frame.cache :
+ # FIXME force the observatory column to actually be instrument
+ gw_data_find -o H -t $(HANFORD_FRAME_TYPE) -l -s $(START) -e $(STOP) --url-type file | awk '{ print $$1" $*_"$$2" "$$3" "$$4" "$$5}' > $@
+
+L1_frame.cache :
+ # FIXME force the observatory column to actually be instrument
+ gw_data_find -o L -t $(LIVINGSTON_FRAME_TYPE) -l -s $(START) -e $(STOP) --url-type file | awk '{ print $$1" $*_"$$2" "$$3" "$$4" "$$5}' > $@
+
+V1_frame.cache :
+ # FIXME force the observatory column to actually be instrument
+ gw_data_find -o V -t $(VIRGO_FRAME_TYPE) -l -s $(START) -e $(STOP) --url-type file | awk '{ print $$1" $*_"$$2" "$$3" "$$4" "$$5}' > $@
+
+# Produce padded segments files
+%_segmentspadded.xml :
+ ligolw_segment_query_dqsegdb --segment-url=${SEG_SERVER} -q --gps-start-time ${START} --gps-end-time ${STOP} --include-segments=$(LIGO_SEGMENTS) --result-name=datasegments > $@
+
+V1_segmentspadded.xml :
+ ligolw_segment_query_dqsegdb --segment-url=${SEG_SERVER} -q --gps-start-time ${START} --gps-end-time ${STOP} --include-segments=$(VIRGO_SEGMENTS) --result-name=datasegments > $@
+
+# Make webpage directory and copy files across
+$(WEBDIR) : $(MAKEFILE_LIST)
+ mkdir -p $(WEBDIR)/OPEN-BOX
+ cp $(MAKEFILE_LIST) $@
+
+# Makes local plots directory
+plots :
+ mkdir plots
+
+clean :
+ -rm -rvf *.sub *.dag* *.cache *.sh logs *.sqlite plots *.html Images *.css *.js
+ -rm -rvf lalapps_run_sqlite/ ligolw_* gstlal_*
+ -rm -vf segments.xml.gz tisi.xml H1-*.xml H1_*.xml L1-*.xml L1_*xml V1-*.xml V1_*xml ?_injections.xml ????-*_split_bank-*.xml vetoes.xml.gz
+ -rm -vf *marginalized*.xml.gz *-ALL_LLOID*.xml.gz
+ -rm -vf tisi0.xml tisi1.xml
+ -rm -rf *_split_bank*
+ -rm -rf nogaps.xml segdb.xml
+ -rm -rf bank_aligned_spin.xml.gz
+ -rm -rf CAT1*.xml.gz
+
diff --git a/gstlal-inspiral/share/post_O2/Makefile.BNS_HL_test_dag_O2 b/gstlal-inspiral/share/post_O2/Makefile.BNS_HL_test_dag_O2
index 0975b71f40..fb074c337f 100644
--- a/gstlal-inspiral/share/post_O2/Makefile.BNS_HL_test_dag_O2
+++ b/gstlal-inspiral/share/post_O2/Makefile.BNS_HL_test_dag_O2
@@ -300,7 +300,6 @@ H1-TMPLTBANK-$(START)-2048.xml: H1_frame.cache
--spectrum-type median \
--verbose
-# NOTE Command should be run with system build
1_injections.xml :
lalapps_inspinj \
--m-distr gaussian \
--
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