From 07290f73e68aaf7be354892212abf3523c484c6e Mon Sep 17 00:00:00 2001
From: Gregory Ashton <gregory.ashton@ligo.org>
Date: Thu, 23 Apr 2020 18:09:38 -0500
Subject: [PATCH] Resolve "Failure to create dynesty run plot at checkpoint"
---
bilby/core/sampler/dynesty.py | 5 ++++-
1 file changed, 4 insertions(+), 1 deletion(-)
diff --git a/bilby/core/sampler/dynesty.py b/bilby/core/sampler/dynesty.py
index 688efc417..8944d43d2 100644
--- a/bilby/core/sampler/dynesty.py
+++ b/bilby/core/sampler/dynesty.py
@@ -433,6 +433,8 @@ class Dynesty(NestedSampler):
sampler_kwargs['add_live'] = True
self._run_nested_wrapper(sampler_kwargs)
+ self.write_current_state()
+ self.plot_current_state()
return self.sampler.results
def _remove_checkpoint(self):
@@ -577,7 +579,8 @@ class Dynesty(NestedSampler):
plt.close("all")
try:
filename = "{}/{}_checkpoint_run.png".format(self.outdir, self.label)
- fig, axs = dyplot.runplot(self.sampler.results)
+ fig, axs = dyplot.runplot(
+ self.sampler.results, logplot=False, use_math_text=False)
fig.tight_layout()
plt.savefig(filename)
except (RuntimeError, np.linalg.linalg.LinAlgError, ValueError) as e:
--
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