From 8c2060b162dd65e7015e4470e61cd8648f12b614 Mon Sep 17 00:00:00 2001
From: Gregory Ashton <gregory.ashton@ligo.org>
Date: Mon, 21 May 2018 20:19:20 +1000
Subject: [PATCH] Remove dependencies
Removes chainconsumer and following requirements. These where causing
the CI to be very slow. Instead, rather than plotting, just list a
warning.
---
.gitlab-ci.yml | 1 -
requirements.txt | 3 +--
tupak/result.py | 6 +++---
3 files changed, 4 insertions(+), 6 deletions(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 20b174c78..6621a33c0 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -21,7 +21,6 @@ exitcode-jessie:
- pip install -r requirements.txt
- pip install coverage
- pip install coverage-badge
- - pip install chainconsumer # Required by some of the example scripts
- python setup.py install
- coverage erase
- coverage run --include=tupak/* -a test/prior_tests.py
diff --git a/requirements.txt b/requirements.txt
index 8903ef167..fe8a629b9 100644
--- a/requirements.txt
+++ b/requirements.txt
@@ -1,10 +1,9 @@
future
dynesty
corner
-patsy>=0.4
numpy>=1.9
matplotlib>=2.0
-scipy>=0.19
+scipy
gwpy
pandas
astropy
diff --git a/tupak/result.py b/tupak/result.py
index be3a05e61..4d5ba821f 100644
--- a/tupak/result.py
+++ b/tupak/result.py
@@ -3,14 +3,14 @@ import os
import numpy as np
import deepdish
import pandas as pd
-import tupak
try:
from chainconsumer import ChainConsumer
except ImportError:
def ChainConsumer():
- raise ImportError(
- "You do not have the optional module chainconsumer installed")
+ logging.warning(
+ "You do not have the optional module chainconsumer installed"
+ " unable to generate a corner plot")
def result_file_name(outdir, label):
--
GitLab