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Commit b468c7d7 authored by Vivien Raymond's avatar Vivien Raymond Committed by Paul Lasky

Update README.rst for new lscsoft location

parent 0503fa9e
......@@ -67,7 +67,7 @@ pages:
script:
- mkdir public/
- mv htmlcov/ public/
- mv /builds/Monash/bilby/coverage_badge.svg public/
- mv coverage_badge.svg public/
- mv docs/_build/html/* public/
artifacts:
paths:
......
......@@ -94,7 +94,7 @@ re-instantiate the Prior in most cases
### Added
- InterferometerStrainData now handles both time-domain and frequencu-domain data
- Adds documentation on setting data (https://monash.docs.ligo.org/bilby/transient-gw-data.html)
- Adds documentation on setting data (https://lscsoft.docs.ligo.org/bilby/transient-gw-data.html)
- Checkpointing for `dynesty`: the sampling will be checkpointed every 10 minutes (approximately) and can be resumed.
- Add functionality to plot multiple results in a corner plot, see `bilby.core.result.plot_multiple()`.
- Likelihood evaluations are now saved along with the posteriors.
......@@ -121,9 +121,8 @@ First `pip` installable version https://pypi.org/project/BILBY/ .
- Major effort to update all docstrings and add some documentation.
- Marginalized likelihoods.
- Examples of searches for gravitational waves from a Supernova and using a sine-Gaussian.
- A `PriorSet` to handle sets of priors and allows reading in from a standardised prior file (see https://monash.docs.ligo.org/bilby/prior.html).
- A `PriorSet` to handle sets of priors and allows reading in from a standardised prior file (see https://lscsoft.docs.ligo.org/bilby/prior.html).
- A standardised file for storing detector data.
### Removed
- All chainconsumer dependency as this was causing issues.
......@@ -9,7 +9,7 @@ Getting started
All the code lives in a git repository (for a short introduction to git, see
[this tutorial](https://docs.gitlab.com/ee/gitlab-basics/start-using-git.html))
which is hosted here: https://git.ligo.org/Monash/bilby. If you haven't
which is hosted here: https://git.ligo.org/lscsoft/bilby. If you haven't
already, you should
[fork](https://docs.gitlab.com/ee/gitlab-basics/fork-project.html) the repository
and clone your fork, i.e., on your local machine run
......@@ -28,7 +28,7 @@ $ python setup.py develop
which will install `bilby` and, because we used `develop` instead of `install`
when you change the code your installed version will automatically be updated.
---
---
#### Removing previously installed versions
......@@ -62,7 +62,7 @@ you've found a bug or would like a feature it doesn't have, we want to
hear from you!
Our main forum for discussion is the project's [GitLab issue
tracker](https://git.ligo.org/Monash/bilby/issues). This is the right
tracker](https://git.ligo.org/lscsoft/bilby/issues). This is the right
place to start a discussion of any of the above or most any other
topic concerning the project.
......@@ -157,11 +157,10 @@ you should:
## Code overview
In this section, we'll give an overview of how the code is structured. This is intended to help orient users and make it easier to contribute. The layout is intended to define the logic of the code and new merge requests should aim to fit within this logic (unless there is a good argument to change it). For example, code which adds a new sampler should not effect the gravitational-wave specific parts of the code. Note that this document is not programatically generated and so may get out of date with time. If you notice something wrong, please open an issue.
In this section, we'll give an overview of how the code is structured. This is intended to help orient users and make it easier to contribute. The layout is intended to define the logic of the code and new merge requests should aim to fit within this logic (unless there is a good argument to change it). For example, code which adds a new sampler should not effect the gravitational-wave specific parts of the code. Note that this document is not programatically generated and so may get out of date with time. If you notice something wrong, please open an issue.
### Bilby Code Layout
![bilby overview](docs/images/bilby_layout.png)
Note this layout is not comprehensive, for example only a few example "Priors" are shown.
......@@ -6,20 +6,20 @@ Bilby
Fulfilling all your Bayesian inference dreams.
- `Installation
instructions <https://monash.docs.ligo.org/bilby/installation.html>`__
- `Contributing <https://git.ligo.org/Monash/bilby/blob/master/CONTRIBUTING.md>`__
- `Documentation <https://monash.docs.ligo.org/bilby/index.html>`__
- `Issue tracker <https://git.ligo.org/Monash/bilby/issues>`__
instructions <https://lscsoft.docs.ligo.org/bilby/installation.html>`__
- `Contributing <https://git.ligo.org/lscsoft/bilby/blob/master/CONTRIBUTING.md>`__
- `Documentation <https://lscsoft.docs.ligo.org/bilby/index.html>`__
- `Issue tracker <https://git.ligo.org/lscsoft/bilby/issues>`__
We encourage you to contribute to the development via a merge request. For
help in creating a merge request, see `this page
<https://docs.gitlab.com/ee/gitlab-basics/add-merge-request.html>`__ or contact
us directly.
.. |pipeline status| image:: https://git.ligo.org/Monash/bilby/badges/master/pipeline.svg
:target: https://git.ligo.org/Monash/bilby/commits/master
.. |coverage report| image:: https://monash.docs.ligo.org/bilby/coverage_badge.svg
:target: https://monash.docs.ligo.org/bilby/htmlcov/
.. |pipeline status| image:: https://git.ligo.org/lscsoft/bilby/badges/master/pipeline.svg
:target: https://git.ligo.org/lscsoft/bilby/commits/master
.. |coverage report| image:: https://lscsoft.docs.ligo.org/bilby/coverage_badge.svg
:target: https://lscsoft.docs.ligo.org/bilby/htmlcov/
.. |pypi| image:: https://badge.fury.io/py/bilby.svg
:target: https://pypi.org/project/bilby/
.. |version| image:: https://img.shields.io/pypi/pyversions/bilby.svg
......
......@@ -9,9 +9,9 @@ estimation. It is primarily designed and built for inference of compact
binary coalescence events in interferometric data, but it can also be used for
more general problems.
The code, and many examples are hosted at https://git.ligo.org/Monash/bilby.
The code, and many examples are hosted at https://git.ligo.org/lscsoft/bilby.
For installation instructions see
https://monash.docs.ligo.org/bilby/installation.html.
https://lscsoft.docs.ligo.org/bilby/installation.html.
"""
......
......@@ -64,7 +64,7 @@ long_description = get_long_description()
setup(name='bilby',
description='A user-friendly Bayesian inference library',
long_description=long_description,
url='https://git.ligo.org/Monash/bilby',
url='https://git.ligo.org/lscsoft/bilby',
author='Greg Ashton, Moritz Huebner, Paul Lasky, Colm Talbot',
author_email='paul.lasky@monash.edu',
license="MIT",
......
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