diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index 901b3d8d4713e4bf3d022309a6b1a127bb8e6613..2c3cdc765f43c2abaab0c5c0d247eccaae97ebf8 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -268,13 +268,16 @@ pages: .build-container: &build-container stage: deploy - image: docker:20.10.12 + image: docker:20.10.23 needs: ["containers"] - except: - refs: - - schedules - changes: - - containers/* + rules: + - if: $CI_PIPELINE_SOURCE == "merge_request_event" + changes: + compare_to: 'refs/heads/main' + paths: + - containers/* + when: manual + - if: $CI_PIPELINE_SOURCE == "schedule" script: - cd containers - docker login -u $CI_REGISTRY_USER -p $CI_REGISTRY_PASSWORD $CI_REGISTRY diff --git a/containers/v3-dockerfile-test-suite-python310 b/containers/v3-dockerfile-test-suite-python310 index 71fd9f37757a8a6b34b68fd4b58e32e48fd9c4b2..a67ea409ce5c84fa60b8174b861b0b33ae044442 100644 --- a/containers/v3-dockerfile-test-suite-python310 +++ b/containers/v3-dockerfile-test-suite-python310 @@ -32,7 +32,7 @@ RUN conda install -n ${conda_env} -c conda-forge scikit-image celerite george # Install dependencies and samplers RUN pip install corner healpy cython tables -RUN conda install -n ${conda_env} dynesty emcee nestle ptemcee pymultinest ultranest cpnest kombine dnest4 zeus-mcmc pytorch pymc nessai ptmcmcsampler -c conda-forge -c pytorch +RUN conda install -n ${conda_env} dynesty emcee nestle ptemcee pymultinest ultranest cpnest kombine dnest4 zeus-mcmc pytorch 'pymc>=4' nessai ptmcmcsampler -c conda-forge -c pytorch # Install Polychord RUN apt-get update --allow-releaseinfo-change diff --git a/containers/v3-dockerfile-test-suite-python38 b/containers/v3-dockerfile-test-suite-python38 index bde0d526d9bd99eab112b5aadab1c3e4cd02b699..3369172c0973fe5090ee0a8aafb88b0cdfd39815 100644 --- a/containers/v3-dockerfile-test-suite-python38 +++ b/containers/v3-dockerfile-test-suite-python38 @@ -32,7 +32,7 @@ RUN conda install -n ${conda_env} -c conda-forge scikit-image celerite george # Install dependencies and samplers RUN pip install corner healpy cython tables -RUN conda install -n ${conda_env} dynesty emcee nestle ptemcee pymultinest ultranest cpnest kombine dnest4 zeus-mcmc pytorch pymc nessai ptmcmcsampler -c conda-forge -c pytorch +RUN conda install -n ${conda_env} dynesty emcee nestle ptemcee pymultinest ultranest cpnest kombine dnest4 zeus-mcmc pytorch 'pymc>=4' nessai ptmcmcsampler -c conda-forge -c pytorch # Install Polychord RUN apt-get update --allow-releaseinfo-change diff --git a/containers/v3-dockerfile-test-suite-python39 b/containers/v3-dockerfile-test-suite-python39 index 5dbafefa38e8d96d0f821d2c74b81e1c6e88478d..6035f103e99a00e9d8255ad330f5fc7e1a786fe6 100644 --- a/containers/v3-dockerfile-test-suite-python39 +++ b/containers/v3-dockerfile-test-suite-python39 @@ -32,7 +32,7 @@ RUN conda install -n ${conda_env} -c conda-forge scikit-image celerite george # Install dependencies and samplers RUN pip install corner healpy cython tables -RUN conda install -n ${conda_env} dynesty emcee nestle ptemcee pymultinest ultranest cpnest kombine dnest4 zeus-mcmc pytorch pymc nessai ptmcmcsampler -c conda-forge -c pytorch +RUN conda install -n ${conda_env} dynesty emcee nestle ptemcee pymultinest ultranest cpnest kombine dnest4 zeus-mcmc pytorch 'pymc>=4' nessai ptmcmcsampler -c conda-forge -c pytorch # Install Polychord RUN apt-get update --allow-releaseinfo-change diff --git a/containers/write_dockerfiles.py b/containers/write_dockerfiles.py index 14bb63ebee9cd1b03d5850aa668e1dbd632850c7..a90d117766a094dea9efe37307c0f93a4c8ea063 100644 --- a/containers/write_dockerfiles.py +++ b/containers/write_dockerfiles.py @@ -6,23 +6,11 @@ with open("dockerfile-template", "r") as ff: python_versions = [(3, 8), (3, 9), (3, 10)] today = date.today().strftime("%Y%m%d") -conda_sampler_dict = dict( - python38=[ - "dynesty", "emcee", "nestle", "ptemcee", "pymultinest", "ultranest", - "cpnest", "kombine", "dnest4", "zeus-mcmc", - "pytorch", "pymc", "nessai", "ptmcmcsampler", - ], - python39=[ - "dynesty", "emcee", "nestle", "ptemcee", "pymultinest", "ultranest", - "cpnest", "kombine", "dnest4", "zeus-mcmc", - "pytorch", "pymc", "nessai", "ptmcmcsampler", - ], - python310=[ - "dynesty", "emcee", "nestle", "ptemcee", "pymultinest", "ultranest", - "cpnest", "kombine", "dnest4", "zeus-mcmc", - "pytorch", "pymc", "nessai", "ptmcmcsampler", - ] -) +samplers = [ + "dynesty", "emcee", "nestle", "ptemcee", "pymultinest", "ultranest", + "cpnest", "kombine", "dnest4", "zeus-mcmc", + "pytorch", "'pymc>=4'", "nessai", "ptmcmcsampler", +] for python_major_version, python_minor_version in python_versions: key = f"python{python_major_version}{python_minor_version}" @@ -38,5 +26,5 @@ for python_major_version, python_minor_version in python_versions: date=today, python_major_version=python_major_version, python_minor_version=python_minor_version, - conda_samplers=" ".join(conda_sampler_dict[key]) + conda_samplers=" ".join(samplers) ))