diff --git a/containers/dockerfile-template b/containers/dockerfile-template index 939ba29ca01b0f263f4c4c2b4e25dceb7533201f..4b09c953d53aec6022406563a574d5a0d2cbf9da 100644 --- a/containers/dockerfile-template +++ b/containers/dockerfile-template @@ -15,7 +15,7 @@ RUN python --version # Install conda-installable programs RUN conda install -n ${{conda_env}} -y matplotlib numpy scipy pandas astropy flake8 -RUN conda install -n ${{conda_env}} -c anaconda coverage configargparse future +RUN conda install -n ${{conda_env}} -c anaconda coverage configargparse future dill RUN conda install -n ${{conda_env}} -c conda-forge black pytest-cov deepdish arviz # Install pip-requirements @@ -25,6 +25,9 @@ RUN pip install --upgrade setuptools coverage-badge parameterized # Install documentation requirements RUN pip install sphinx numpydoc nbsphinx sphinx_rtd_theme sphinx-tabs autodoc +# Install testing requirements +RUN conda install -n ${{conda_env}} -c conda-forge scikit-image celerite george + # Install dependencies and samplers RUN pip install corner healpy cython tables RUN conda install -n ${{conda_env}} -c conda-forge dynesty emcee nestle ptemcee @@ -52,7 +55,7 @@ RUN git clone https://github.com/jellis18/PTMCMCSampler.git \ # Install GW packages RUN conda install -n ${{conda_env}} -c conda-forge python-lalsimulation -RUN pip install ligo-gracedb gwpy ligo.skymap +RUN pip install ligo-gracedb gwpy ligo.skymap bilby.cython # Add the ROQ data to the image RUN mkdir roq_basis \ diff --git a/containers/v3-dockerfile-test-suite-python38 b/containers/v3-dockerfile-test-suite-python38 index 080f1fd2274b8fab1e500f47a20a050abd47adcb..65e93c16ee9bf28e482fd590ce24888ab2fdbd13 100644 --- a/containers/v3-dockerfile-test-suite-python38 +++ b/containers/v3-dockerfile-test-suite-python38 @@ -17,7 +17,7 @@ RUN python --version # Install conda-installable programs RUN conda install -n ${conda_env} -y matplotlib numpy scipy pandas astropy flake8 -RUN conda install -n ${conda_env} -c anaconda coverage configargparse future +RUN conda install -n ${conda_env} -c anaconda coverage configargparse future dill RUN conda install -n ${conda_env} -c conda-forge black pytest-cov deepdish arviz # Install pip-requirements @@ -27,6 +27,9 @@ RUN pip install --upgrade setuptools coverage-badge parameterized # Install documentation requirements RUN pip install sphinx numpydoc nbsphinx sphinx_rtd_theme sphinx-tabs autodoc +# Install testing requirements +RUN conda install -n ${conda_env} -c conda-forge scikit-image celerite george + # Install dependencies and samplers RUN pip install corner healpy cython tables RUN conda install -n ${conda_env} -c conda-forge dynesty emcee nestle ptemcee @@ -54,7 +57,7 @@ RUN git clone https://github.com/jellis18/PTMCMCSampler.git \ # Install GW packages RUN conda install -n ${conda_env} -c conda-forge python-lalsimulation -RUN pip install ligo-gracedb gwpy ligo.skymap +RUN pip install ligo-gracedb gwpy ligo.skymap bilby.cython # Add the ROQ data to the image RUN mkdir roq_basis \ diff --git a/containers/v3-dockerfile-test-suite-python39 b/containers/v3-dockerfile-test-suite-python39 index 91b906ef83badb352d0e26edf70b271ab2cda2a1..7b4dbd849c3ebcf275242669302729e7762d99d6 100644 --- a/containers/v3-dockerfile-test-suite-python39 +++ b/containers/v3-dockerfile-test-suite-python39 @@ -17,7 +17,7 @@ RUN python --version # Install conda-installable programs RUN conda install -n ${conda_env} -y matplotlib numpy scipy pandas astropy flake8 -RUN conda install -n ${conda_env} -c anaconda coverage configargparse future +RUN conda install -n ${conda_env} -c anaconda coverage configargparse future dill RUN conda install -n ${conda_env} -c conda-forge black pytest-cov deepdish arviz # Install pip-requirements @@ -27,6 +27,9 @@ RUN pip install --upgrade setuptools coverage-badge parameterized # Install documentation requirements RUN pip install sphinx numpydoc nbsphinx sphinx_rtd_theme sphinx-tabs autodoc +# Install testing requirements +RUN conda install -n ${conda_env} -c conda-forge scikit-image celerite george + # Install dependencies and samplers RUN pip install corner healpy cython tables RUN conda install -n ${conda_env} -c conda-forge dynesty emcee nestle ptemcee @@ -54,7 +57,7 @@ RUN git clone https://github.com/jellis18/PTMCMCSampler.git \ # Install GW packages RUN conda install -n ${conda_env} -c conda-forge python-lalsimulation -RUN pip install ligo-gracedb gwpy ligo.skymap +RUN pip install ligo-gracedb gwpy ligo.skymap bilby.cython # Add the ROQ data to the image RUN mkdir roq_basis \