| ... | @@ -36,7 +36,7 @@ We compare all results to LALInference Nest and MCMC runs using the IMRPhenomPv2 |
... | @@ -36,7 +36,7 @@ We compare all results to LALInference Nest and MCMC runs using the IMRPhenomPv2 |
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These are the top-level instructions for PE-group members running bilby on the known events and comparing the results with LALInference. If you have questions or comments, we plan to coordinate on the [bilby-devel](https://chat.ligo.org/ligo/channels/bilby-devel) channel of chat.ligo.
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These are the top-level instructions for PE-group members running bilby on the known events and comparing the results with LALInference. If you have questions or comments, we plan to coordinate on the [bilby-devel](https://chat.ligo.org/ligo/channels/bilby-devel) channel of chat.ligo.
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1. Identify a python installation with `bilby>=0.5.4`, and `bilby_pipe>=0.2.3`. You are free to do this however you like, one easy way (on CIT) is to run the following commands:
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**1. Identify a python installation** with `bilby>=0.5.4`, and `bilby_pipe>=0.2.3`. You are free to do this however you like, one easy way (on CIT) is to run the following commands:
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```bash
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```bash
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$ source /cvmfs/ligo-containers.opensciencegrid.org/lscsoft/conda/latest/etc/profile.d/conda.sh
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$ source /cvmfs/ligo-containers.opensciencegrid.org/lscsoft/conda/latest/etc/profile.d/conda.sh
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| ... | @@ -50,22 +50,22 @@ $ bilby_pipe --version |
... | @@ -50,22 +50,22 @@ $ bilby_pipe --version |
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bilby_pipe 0.2.3: (CLEAN) 7e96aaa 2019-08-15 10:11:12 +1000
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bilby_pipe 0.2.3: (CLEAN) 7e96aaa 2019-08-15 10:11:12 +1000
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```
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```
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2. Clone the [bilby event samples repository](https://git.ligo.org/gregory.ashton/bilby_pe_event_samples), this is where all results will ultimately be hosted.
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**2. Clone** the [bilby event samples repository](https://git.ligo.org/gregory.ashton/bilby_pe_event_samples), this is where all results will ultimately be hosted.
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3. Copy the `run_settings_directory` from your event to somewhere which makes sense to you, for example
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**3. Copy** the `run_settings_directory` from your event to somewhere which makes sense to you, for example
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```bash
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```bash
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$ mkdir ~/public_html/bilby_runs/GWXXXXXX/
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$ mkdir ~/public_html/bilby_runs/GWXXXXXX/
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$ cp ~/bilby_pe_event_samples/GWXXXXXX/run_setting_files/* ~/public_html/bilby_runs/GWXXXXXX/
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$ cp ~/bilby_pe_event_samples/GWXXXXXX/run_setting_files/* ~/public_html/bilby_runs/GWXXXXXX/
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```
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```
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3. Run bilby on your event using the configuration files and priors listed above
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**3. Run bilby** on your event using the configuration files and priors listed above
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```bash
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```bash
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$ ~/public_html/bilby_runs/GWXXXXXX/
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$ ~/public_html/bilby_runs/GWXXXXXX/
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$ bilby_pipe GWXXXXXX_dynesty_IMRPhenomPV2.ini --submit
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$ bilby_pipe GWXXXXXX_dynesty_IMRPhenomPV2.ini --submit
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```
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```
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4. Import the results using the `import_results.py` script
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**4. Import the results** using the `import_results.py` script
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5. Identify the set of LALInference posterior samples (ideally one for MCMC and one for Nest) that you'll compare against.
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**5. Identify the set of LALInference posterior samples** (ideally one for MCMC and one for Nest) that you'll compare against.
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6. Create a pesummary page comparing the reweighted bilby samples and the L.I. results |
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**6. Create a pesummary page** comparing the reweighted bilby samples and the L.I. results |
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