Commit ab90f91a authored by John Douglas Veitch's avatar John Douglas Veitch 💬
Browse files

Make lalinference_pipe able to interpolate options

parent 1bcb09ee
......@@ -109,46 +109,50 @@ ignore-science-segments=True
[condor]
# Replace with your own executable locations
datafind=/home/albert.einstein/bin/gw_data_find
mergeNSscript=/home/albert.einstein/bin/lalapps_nest2pos
mergeMCMCscript=/home/albert.einstein/bin/cbcBayesMCMC2pos
combinePTMCMCh5script=/home/albert.einstein/bin/cbcBayesCombinePTMCMCh5s
resultspage=/home/albert.einstein/bin/cbcBayesPostProc
segfind=/home/albert.einstein/bin/ligolw_segment_query
ligolw_print=/home/albert.einstein/bin/ligolw_print
coherencetest=/home/albert.einstein/bin/lalapps_coherence_test
lalinferencenest=/home/albert.einstein/bin/lalinference_nest
lalinferencemcmc=/home/albert.einstein/bin/lalinference_mcmc
lalinferencebambi=/home/albert.einstein/bin/lalinference_bambi
lalinferencedatadump=/home/albert.einstein/bin/lalinference_datadump
# Can use this option to specify the installation location
# and interpolate the exe paths
lalsuite-install=/home/albert.einstein/opt/lalsuite/
datafind=%(lalsuite-install)s/bin/gw_data_find
mergeNSscript=%(lalsuite-install)s/bin/lalapps_nest2pos
mergeMCMCscript=%(lalsuite-install)s/bin/cbcBayesMCMC2pos
combinePTMCMCh5script=%(lalsuite-install)s/bin/cbcBayesCombinePTMCMCh5s
resultspage=%(lalsuite-install)s/bin/cbcBayesPostProc
segfind=%(lalsuite-install)s/bin/ligolw_segment_query
ligolw_print=%(lalsuite-install)s/bin/ligolw_print
coherencetest=%(lalsuite-install)s/bin/lalapps_coherence_test
lalinferencenest=%(lalsuite-install)s/bin/lalinference_nest
lalinferencemcmc=%(lalsuite-install)s/bin/lalinference_mcmc
lalinferencebambi=%(lalsuite-install)s/bin/lalinference_bambi
lalinferencedatadump=%(lalsuite-install)s/bin/lalinference_datadump
# Bayeswave code from https://wiki.ligo.org/Bursts/BayesWave/RunningBayesWaveBurst
# Disabled by default, uncomment line below to use it
# bayeswave=/home/albert.einstein/bin/bayeswave
# bayeswave=%(lalsuite-install)s/bin/bayeswave
# Skyareas code from https://github.com/farr/skyarea
# Comment line below not to use it
skyarea=/home/albert.einstein/bin/run_sky_area
skyarea=%(lalsuite-install)s/bin/run_sky_area
# To have 2D sky PP plot while running the PP pipeline both skyareas above and processareas below must be given
# Comment line below not to use it
processareas=/home/albert.einstein/bin/process_areas
processareas=%(lalsuite-install)s/bin/process_areas
# ROQ weight computation, requires roq_b_matrix_directory in the [paths] section
# Disabled by default, uncomment line below to use it
# computeroqweights=/home/albert.einstein/bin/lalapps_compute_roq_weights
# computeroqweights=%(lalsuite-install)s/bin/lalapps_compute_roq_weights
# MPIrun only needed for MCMC, if not available use /bin/true
mpirun=/home/albert.einstein/bin/mpirun
mpirun=%(lalsuite-install)s/bin/mpirun
# Wrapper script for MPI jobs
mpiwrapper=/home/albert.einstein/bin/lalinference_mpi_wrapper
mpiwrapper=%(lalsuite-install)s/bin/lalinference_mpi_wrapper
# GraceDB only needed for online analysis, if not available use /bin/true
gracedb=/home/albert.einstein/bin/gracedb
gracedb=%(lalsuite-install)s/bin/gracedb
# Scripts needed only for PP check pipeline
ppanalysis=/home/albert.einstein/bin/cbcBayesPPAnalysis
pos_to_sim_inspiral=/home/albert.einstein/bin/cbcBayesPosToSimInspiral
ppanalysis=%(lalsuite-install)s/bin/cbcBayesPPAnalysis
pos_to_sim_inspiral=%(lalsuite-install)s/bin/cbcBayesPosToSimInspiral
# Queue information if needed to run on specific nodes
#queue=
......
......@@ -180,7 +180,7 @@ for sampler in samps:
inifile=args[0]
cp=ConfigParser.ConfigParser()
cp=ConfigParser.SafeConfigParser()
fp=open(inifile)
cp.optionxform = str
cp.readfp(fp)
......
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