O4-Code-Review.md

@@ -28,6 +28,8 @@ Note the failure of convergence of the nessai run. These settings have proved to
 | Millilensed GW150914-like as Millilensing | `CIT:/home/mick.wright/gravelamps-o4-review/milli-as-milli` | [Corner](https://ldas-jobs.ligo.caltech.edu/\~mick.wright/gravelamps-o4-review/milli-as-milli-corner.png) |
 | Millilensed GW150914-like as Unlensed | `CIT:/home/mick.wright/gravelamps-o4-review/milli-as-unlensed` | [Corner](https://ldas-jobs.ligo.caltech.edu/\~mick.wright/gravelamps-o4-review/milli-as-unlensed-corner.png) |
 
+#### Bayes Factors 
+
 | Run Type | Bayes Factor (Other Lensing) | Bayes Factor (Non-Lensing) |
 | -------- | ---------------------------- | -------------------------- |
 | Microlensing | 3707.914 | 3707.9814 |
@@ -35,3 +37,41 @@ Note the failure of convergence of the nessai run. These settings have proved to
 
 Runs indicate error in the millilensing setup. Microlensed runs behaving as expected so far. 
 Relatively minor difference between the millilensing and non-lensing as compared to the microlensing cases is curious. 
+
+#### Individual Chain Plots for Microlensing Test Run
+
+| Chain Title | Corner Plot |
+| ----------- | ----------- |
+| Chain 0 | [Corner](https://ldas-jobs.ligo.caltech.edu/~mick.wright/gravelamps-o4-review/chain_0.png) |
+| Chain 1 | [Corner](https://ldas-jobs.ligo.caltech.edu/~mick.wright/gravelamps-o4-review/chain_1.png) |
+| Chain 2 | [Corner](https://ldas-jobs.ligo.caltech.edu/~mick.wright/gravelamps-o4-review/chain_2.png) |
+| Chain 3 | [Corner](https://ldas-jobs.ligo.caltech.edu/~mick.wright/gravelamps-o4-review/chain_3.png) | 
+
+It would seem that the odd plotting behaviour of the combined samples is present in Chain 2, but all chains are in agreement.  
+
+### Candidate O4 Sampling Review Tests
+
+These runs use the configuration from the microlensing true run with the candidate sampler settings from the O4 Sampler Review. 
+
+- Candidate O4 Bilby Version: 2.1.0
+- Candidate O4 Bilby Pipe Verison: 1.0.10
+
+#### Dynesty
+
+- Run Directory: `UWM:/home/mick.wright/gravelamps-o4-review/sampler-settings/dynesty-review-candidate`
+- Status: Running
+
+#### Bilby MCMC
+
+- Run Directory: `UWM:/home/mick.wright/gravlemaps-o4-review/sampler-settings/bilby-mcmc-review-candidate`
+- Status: Running
+
+#### Nessai
+
+## Lens Generation
+
+| Lens Model | Run Status | Run Directory | Amplification Plot |
+| ---------- | ---------- | ------------- | ------------------ |
+| Point | Complete | UWM:`/home/mick.wright/gravelmaps-o4-review/generation-runs/point-generation` | |
+| SIS | Running | UWM:`/home/mick.wright/gravelamps-o4-review/generation-runs/sis-generation` | |
+| NFW | Running | UWM:`/home/mick.wright/gravelamps-o4-review/generation-runs/nfw-generation` | | 
\ No newline at end of file