O4-Code-Review.md

@@ -28,10 +28,50 @@ Note the failure of convergence of the nessai run. These settings have proved to
 | Millilensed GW150914-like as Millilensing | `CIT:/home/mick.wright/gravelamps-o4-review/milli-as-milli` | [Corner](https://ldas-jobs.ligo.caltech.edu/\~mick.wright/gravelamps-o4-review/milli-as-milli-corner.png) |
 | Millilensed GW150914-like as Unlensed | `CIT:/home/mick.wright/gravelamps-o4-review/milli-as-unlensed` | [Corner](https://ldas-jobs.ligo.caltech.edu/\~mick.wright/gravelamps-o4-review/milli-as-unlensed-corner.png) |
 
+#### Bayes Factors 
+
 | Run Type | Bayes Factor (Other Lensing) | Bayes Factor (Non-Lensing) |
 | -------- | ---------------------------- | -------------------------- |
 | Microlensing | 3707.914 | 3707.9814 |
 | Millilensing | -201.403 | 8.794 | 
 
 Runs indicate error in the millilensing setup. Microlensed runs behaving as expected so far. 
-Relatively minor difference between the millilensing and non-lensing as compared to the microlensing cases is curious. 
\ No newline at end of file
+Relatively minor difference between the millilensing and non-lensing as compared to the microlensing cases is curious. 
+
+#### Individual Chain Plots for Microlensing Test Run
+
+| Chain Title | Corner Plot |
+| ----------- | ----------- |
+| Chain 0 | [Corner](https://ldas-jobs.ligo.caltech.edu/~mick.wright/gravelamps-o4-review/chain_0.png) |
+| Chain 1 | [Corner](https://ldas-jobs.ligo.caltech.edu/~mick.wright/gravelamps-o4-review/chain_1.png) |
+| Chain 2 | [Corner](https://ldas-jobs.ligo.caltech.edu/~mick.wright/gravelamps-o4-review/chain_2.png) |
+| Chain 3 | [Corner](https://ldas-jobs.ligo.caltech.edu/~mick.wright/gravelamps-o4-review/chain_3.png) | 
+
+It would seem that the odd plotting behaviour of the combined samples is present in Chain 2, but all chains are in agreement.  
+
+### Candidate O4 Sampling Review Tests
+
+These runs use the configuration from the microlensing true run with the candidate sampler settings from the O4 Sampler Review. 
+
+- Candidate O4 Bilby Version: 2.1.0
+- Candidate O4 Bilby Pipe Verison: 1.0.10
+
+#### Dynesty
+
+- Run Directory: `UWM:/home/mick.wright/gravelamps-o4-review/sampler-settings/dynesty-review-candidate`
+- Status: Running
+
+#### Bilby MCMC
+
+- Run Directory: `UWM:/home/mick.wright/gravlemaps-o4-review/sampler-settings/bilby-mcmc-review-candidate`
+- Status: Running
+
+#### Nessai
+
+## Lens Generation
+
+| Lens Model | Run Status | Run Directory | Amplification Plot |
+| ---------- | ---------- | ------------- | ------------------ |
+| Point | Complete | UWM:`/home/mick.wright/gravelmaps-o4-review/generation-runs/point-generation` | |
+| SIS | Running | UWM:`/home/mick.wright/gravelamps-o4-review/generation-runs/sis-generation` | |
+| NFW | Running | UWM:`/home/mick.wright/gravelamps-o4-review/generation-runs/nfw-generation` | | 
\ No newline at end of file