Bugfix/report copy files before init

copy model and config files to new report dir on create prior to initialization.

this fixes an error recently introduced in which the creation of new reports fails due to non-existent model and config files in the report directory. Instead we first copy the model file template and the cmd runtime file and then initialize the report class.

This error was present at both sites. I've confirmed that the commits in this MR fixes report generation at both sites.