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Fix timer in user IOP

Christopher Wipf requested to merge christopher.wipf/advligorts:timerfix into master

The previous version did not handle overflow correctly, which resulted in large excursions in the cycle time.

Here is a plot of IOP cycle time in nanoseconds, without the fix. This is supposed to be 15259 ns for a 65536 Hz IOP. Big glitches are seen every second as the tv_nsec value overflows. timerbroken

And here is how it looks with the change applied. timerfixed

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