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Improvements to integration tests

Duncan Macleod requested to merge duncanmmacleod/conda:render-marks-pytest into testing

This MR makes the following improvements to the integration testing configuration

  • set *_NUM_THREADS=1 for all appropriate variables - to try and force all integration tests to only use a single core
  • run top-level pytest with better options
  • enable marks for test commands, mainly to mark things as flaky
  • add a test/pytest option to simplify running pytest suites as integration tests
  • use the test/pytest option everywhere a manual pytest call was configured

This is an evolution of !386 (closed) with a better branch name.

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