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Duncan Macleod
gstlal
Commits
14054e41
Commit
14054e41
authored
5 years ago
by
Chad Hanna
Committed by
Chad Hanna
5 years ago
Browse files
Options
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Patches
Plain Diff
inspiral_pipe.py: make with zerolag optional
(cherry picked from commit
bea5f07f
)
parent
096c3483
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1 changed file
gstlal-inspiral/python/inspiral_pipe.py
+35
-26
35 additions, 26 deletions
gstlal-inspiral/python/inspiral_pipe.py
with
35 additions
and
26 deletions
gstlal-inspiral/python/inspiral_pipe.py
+
35
−
26
View file @
14054e41
...
...
@@ -659,7 +659,7 @@ def marginalize_layer(dag, jobs, svd_nodes, lloid_output, lloid_diststats, optio
return
margnodes
def
calc_rank_pdf_layer
(
dag
,
jobs
,
marg_nodes
,
options
,
boundary_seg
,
instrument_set
):
def
calc_rank_pdf_layer
(
dag
,
jobs
,
marg_nodes
,
options
,
boundary_seg
,
instrument_set
,
with_zero_lag
=
False
):
rankpdf_nodes
=
[]
rankpdf_zerolag_nodes
=
[]
instruments
=
""
.
join
(
sorted
(
instrument_set
))
...
...
@@ -674,16 +674,16 @@ def calc_rank_pdf_layer(dag, jobs, marg_nodes, options, boundary_seg, instrument
input_files
=
{
""
:
marg_nodes
[
bin_key
].
output_files
[
"
output
"
]},
output_files
=
{
"
output
"
:
rankfile
(
'
CALC_RANK_PDFS
'
,
job
=
jobs
[
'
calcRankPDFs
'
])},
)
calcrankzerolagnode
=
dagparts
.
DAGNode
(
jobs
[
'
calcRankPDFsWithZerolag
'
],
dag
,
parent_nodes
=
[
marg_nodes
[
bin_key
]],
opts
=
{
"
add-zerolag-to-background
"
:
""
,
"
ranking-stat-samples
"
:
options
.
ranking_stat_samples
},
input_files
=
{
""
:
marg_nodes
[
bin_key
].
output_files
[
"
output
"
]},
output_files
=
{
"
output
"
:
rankfile
(
'
CALC_RANK_PDFS_WZL
'
,
job
=
jobs
[
'
calcRankPDFsWithZerolag
'
])},
)
rankpdf_nodes
.
append
(
calcranknode
)
rankpdf_zerolag_nodes
.
append
(
calcrankzerolagnode
)
if
with_zero_lag
:
calcrankzerolagnode
=
dagparts
.
DAGNode
(
jobs
[
'
calcRankPDFsWithZerolag
'
],
dag
,
parent_nodes
=
[
marg_nodes
[
bin_key
]],
opts
=
{
"
add-zerolag-to-background
"
:
""
,
"
ranking-stat-samples
"
:
options
.
ranking_stat_samples
},
input_files
=
{
""
:
marg_nodes
[
bin_key
].
output_files
[
"
output
"
]},
output_files
=
{
"
output
"
:
rankfile
(
'
CALC_RANK_PDFS_WZL
'
,
job
=
jobs
[
'
calcRankPDFsWithZerolag
'
])},
)
rankpdf_zerolag_nodes
.
append
(
calcrankzerolagnode
)
return
rankpdf_nodes
,
rankpdf_zerolag_nodes
...
...
@@ -722,7 +722,7 @@ def likelihood_layer(dag, jobs, marg_nodes, lloid_output, lloid_diststats, optio
return
likelihood_nodes
def
sql_cluster_and_merge_layer
(
dag
,
jobs
,
likelihood_nodes
,
ligolw_add_nodes
,
options
,
boundary_seg
,
instruments
):
def
sql_cluster_and_merge_layer
(
dag
,
jobs
,
likelihood_nodes
,
ligolw_add_nodes
,
options
,
boundary_seg
,
instruments
,
with_zero_lag
=
False
):
num_chunks
=
100
innodes
=
{}
...
...
@@ -822,11 +822,13 @@ def sql_cluster_and_merge_layer(dag, jobs, likelihood_nodes, ligolw_add_nodes, o
noninjdb
=
dagparts
.
T050017_filename
(
instruments
,
'
ALL_LLOID
'
,
boundary_seg
,
'
.sqlite
'
)
noninjsqlitenode
=
merge_cluster_layer
(
dag
,
jobs
,
final_nodes
,
noninjdb
,
input_cache_files
,
options
.
cluster_sql_file
,
input_files
=
input_files
)
cpnode
=
dagparts
.
DAGNode
(
jobs
[
'
cp
'
],
dag
,
parent_nodes
=
[
noninjsqlitenode
],
input_files
=
{
""
:
"
%s %s
"
%
(
noninjdb
,
noninjdb
.
replace
(
'
ALL_LLOID
'
,
'
ALL_LLOID_WZL
'
))}
)
outnodes
.
append
(
cpnode
)
if
with_zero_lag
:
cpnode
=
dagparts
.
DAGNode
(
jobs
[
'
cp
'
],
dag
,
parent_nodes
=
[
noninjsqlitenode
],
input_files
=
{
""
:
"
%s %s
"
%
(
noninjdb
,
noninjdb
.
replace
(
'
ALL_LLOID
'
,
'
ALL_LLOID_WZL
'
))}
)
outnodes
.
append
(
cpnode
)
else
:
outnodes
.
append
(
noninjsqlitenode
)
if
options
.
injections
:
iterable_injections
=
options
.
injections
...
...
@@ -894,21 +896,25 @@ def sql_cluster_and_merge_layer(dag, jobs, likelihood_nodes, ligolw_add_nodes, o
input_files
=
{
""
:
xml_input
}
)
cpnode
=
dagparts
.
DAGNode
(
jobs
[
'
cp
'
],
dag
,
parent_nodes
=
[
sqlitenode
],
input_files
=
{
""
:
"
%s %s
"
%
(
injdb
,
injdb
.
replace
(
'
ALL_LLOID
'
,
'
ALL_LLOID_WZL
'
))}
)
outnodes
.
append
(
cpnode
)
if
with_zero_lag
:
cpnode
=
dagparts
.
DAGNode
(
jobs
[
'
cp
'
],
dag
,
parent_nodes
=
[
sqlitenode
],
input_files
=
{
""
:
"
%s %s
"
%
(
injdb
,
injdb
.
replace
(
'
ALL_LLOID
'
,
'
ALL_LLOID_WZL
'
))}
)
outnodes
.
append
(
cpnode
)
else
:
outnodes
.
append
(
sqlitenode
)
return
injdbs
,
noninjdb
,
outnodes
,
dbs_to_delete
def
final_marginalize_layer
(
dag
,
jobs
,
rankpdf_nodes
,
rankpdf_zerolag_nodes
,
options
):
def
final_marginalize_layer
(
dag
,
jobs
,
rankpdf_nodes
,
rankpdf_zerolag_nodes
,
options
,
with_zero_lag
=
False
):
ranknodes
=
[
rankpdf_nodes
,
rankpdf_zerolag_nodes
]
margjobs
=
[
jobs
[
'
marginalize
'
],
jobs
[
'
marginalizeWithZerolag
'
]]
margfiles
=
[
options
.
marginalized_likelihood_file
,
options
.
marginalized_likelihood_file
]
filesuffixs
=
[
''
,
'
_with_zerolag
'
]
if
with_zero_lag
:
filesuffixs
=
[
''
,
'
_with_zerolag
'
]
else
:
filesuffixs
=
[
''
]
margnum
=
16
all_margcache
=
[]
all_margnodes
=
[]
...
...
@@ -952,11 +958,14 @@ def final_marginalize_layer(dag, jobs, rankpdf_nodes, rankpdf_zerolag_nodes, opt
return
final_margnodes
,
dagparts
.
flatten
(
all_margcache
)
def
compute_far_layer
(
dag
,
jobs
,
margnodes
,
injdbs
,
noninjdb
,
final_sqlite_nodes
,
options
):
def
compute_far_layer
(
dag
,
jobs
,
margnodes
,
injdbs
,
noninjdb
,
final_sqlite_nodes
,
options
,
with_zero_lag
=
False
):
"""
compute FAPs and FARs
"""
margfiles
=
[
options
.
marginalized_likelihood_file
,
options
.
marginalized_likelihood_file
]
filesuffixs
=
[
''
,
'
_with_zerolag
'
]
if
with_zero_lag
:
filesuffixs
=
[
''
,
'
_with_zerolag
'
]
else
:
filesuffixs
=
[
''
]
if
options
.
marginalized_likelihood_file
:
### injection-only run
assert
not
margnodes
,
"
no marg nodes should be produced in an injection-only DAG
"
margnodes
=
[
None
,
None
]
...
...
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