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fix coverage typing and lint checks

Chad Hannarequested to merge
coverage-typing-and-lint into main

This gets make working without errors and puts the code coverage back up to 100% (at least on my mac - we should make sure that in fact the CI pipeline is also at 100%)

---------- coverage: platform darwin, python 3.9.21-final-0 ----------
Name                                Stmts   Miss  Cover   Missing
-----------------------------------------------------------------
src/sgnts/base/array_backend.py        31      0   100%
src/sgnts/base/array_ops.py            20      0   100%
src/sgnts/base/audioadapter.py        139      0   100%
src/sgnts/base/buffer.py              292      0   100%
src/sgnts/base/notorch_backend.py       5      0   100%
src/sgnts/base/numpy_backend.py        42      0   100%
src/sgnts/base/offset.py               35      0   100%
src/sgnts/base/slice_tools.py         117      0   100%
src/sgnts/base/time.py                  6      0   100%
src/sgnts/base/torch_backend.py        47      0   100%
src/sgnts/sources/fake_series.py       79      0   100%
src/sgnts/sources/segment.py           24      0   100%
src/sgnts/transforms/adder.py          38      0   100%
src/sgnts/transforms/align.py          15      0   100%
src/sgnts/transforms/amplify.py        22      0   100%
src/sgnts/transforms/converter.py      52      0   100%
src/sgnts/transforms/correlate.py      43      0   100%
src/sgnts/transforms/gate.py           19      0   100%
src/sgnts/transforms/matmul.py         27      0   100%
src/sgnts/transforms/resampler.py     101      0   100%
src/sgnts/transforms/sumindex.py       34      0   100%
src/sgnts/transforms/threshold.py      40      0   100%
src/sgnts/utils.py                     20      0   100%
-----------------------------------------------------------------
TOTAL                                1248      0   100%

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