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Draft: Resolve "Check that all pads in a pipeline are linked"

Joshua Gonsalves requested to merge 2-check-that-all-pads-in-a-pipeline-are-linked-2 into main

Closes #2 (Sorry about the long branch name)

Adds an 'is_linked' attribute to all pads, which is set to False. Calling link() sets self.is_linked and other.is_linked to True.

Adds an attribute Pipeline.elements that stores every Element object. run() iterates through Pipeline.elements and verifies is_linked=True for all elements.

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