First working version of the end-to-end pipe

bilby_pipe/main.py

@@ -267,10 +267,15 @@ class Dag(object):
         log = job_logs_path
         output = job_logs_path
         submit = self.inputs.outdir
-        name = self.inputs.label + '_postprocessing'
+        name = self.inputs.label + '_combined'
         extra_lines = 'accounting_group={}'.format(self.inputs.accounting)
-        arguments = ('-r {}/*h5 -f {}/combined.png'
-                     .format(self.inputs.outdir, self.inputs.outdir))
+        expected_h5_files = ['{}/{}_result.h5'.format(self.inputs.outdir,
+                                                      job.name)
+                             for job in self.jobs]
+        labels = ' '.join(''.join(job['detectors']) for job in self.jobs_inputs)
+        arguments = ('-r {} -f {}/{}_corner.png -l {}'
+                     .format(' '.join(expected_h5_files), self.inputs.outdir,
+                             name, labels))
         executable = '/home/gregory.ashton/anaconda3/bin/bilby_plot'
         post_job = pycondor.Job(
             name=name, executable=executable, extra_lines=extra_lines,

bilby_pipe/summary.py

@@ -13,7 +13,7 @@ header = ('''
 section_template = (''''
 <div class="container">
   <h2> {title} </h2>
-  <button type="button" class="btn btn-info" data-toggle="collapse" data-target="#{title}">Simple collapsible</button>
+  <button type="button" class="btn btn-info" data-toggle="collapse" data-target="#{title}">corner plot </button>
   <div id="{title}" class="collapse">
       <img src="{corner_file_path}" alt="No image available" style="width:700px;">
   </div>