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ligolw_run_sqlite: port to dbtables.workingcopy

Patrick Godwin requested to merge patrick.godwin/python-ligo-lw:temp_store into master

This fixes issues like:

Traceback (most recent call last):
  File "/usr/bin/ligolw_run_sqlite", line 94, in <module>
    dbtables.set_temp_store_directory(connection, options.tmp_space, verbose = options.verbose)
AttributeError: module 'ligo.lw.dbtables' has no attribute 'set_temp_store_directory'

I have tried to preserve the logic as much as possible during the port, but due to how the working copy is introduced, it's done in a slightly different order which should end up being equivalent.

I have also modified the conditional logic for checking the file type (xml/sqlite) slightly, to simplify some code paths and remove a path that will never be triggered. Hopefully that's okay.

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