Merge remote-tracking branch 'origin/master'

.gitignore

-# Byte-compiled / optimized / DLL files
-__pycache__/
-*.py[cod]
-*$py.class
-
-# C extensions
-*.so
-
-# Distribution / packaging
-.Python
-build/
-develop-eggs/
-dist/
-downloads/
-eggs/
-.eggs/
-lib/
-lib64/
-parts/
-sdist/
-var/
-wheels/
-*.egg-info/
-.installed.cfg
-*.egg
-MANIFEST
-.version
-
-# PyInstaller
-#  Usually these files are written by a python script from a template
-#  before PyInstaller builds the exe, so as to inject date/other infos into it.
-*.manifest
-*.spec
-
-# Installer logs
-pip-log.txt
-pip-delete-this-directory.txt
-
-# Unit test / coverage reports
-htmlcov/
-.tox/
-.coverage
-.coverage.*
-.cache
-nosetests.xml
-coverage.xml
-*.cover
-.hypothesis/
-.pytest_cache/
-
-# Translations
-*.mo
-*.pot
-
-# Django stuff:
-*.log
-local_settings.py
-db.sqlite3
-
-# Flask stuff:
-instance/
-.webassets-cache
-
-# Scrapy stuff:
-.scrapy
-
-# Sphinx documentation
-docs/_build/
-
-# PyBuilder
-target/
-
-# Jupyter Notebook
-.ipynb_checkpoints
-
-# pyenv
-.python-version
-
-# celery beat schedule file
-celerybeat-schedule
-
-# SageMath parsed files
-*.sage.py
-
-# Environments
-.env
-.venv
-env/
-venv/
-ENV/
-env.bak/
-venv.bak/
-
-# Spyder project settings
-.spyderproject
-.spyproject
-
-# Rope project settings
-.ropeproject
-
-# mkdocs documentation
-/site
-
-# mypy
-.mypy_cache/
-
-# Idea
-/.idea
-*.idea
-*.idea*
-
-#.txt files
-
-#*.txt
-
-# Images
-
-*.jpg
-*.png
-
-# Output directories
-
-**/outdir
\ No newline at end of file

LICENSE.md

-MIT License
-
-Copyright (c) 2018 Paul D. Lasky
-
-Permission is hereby granted, free of charge, to any person obtaining a copy
-of this software and associated documentation files (the "Software"), to deal
-in the Software without restriction, including without limitation the rights
-to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
-copies of the Software, and to permit persons to whom the Software is
-furnished to do so, subject to the following conditions:
-
-The above copyright notice and this permission notice shall be included in all
-copies or substantial portions of the Software.
-
-THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
-IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
-FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
-AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
-LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
-OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
-SOFTWARE.

README.md

-[![pipeline status](https://git.ligo.org/Monash/tupak/badges/master/pipeline.svg)](https://git.ligo.org/Monash/tupak/commits/master)
-[![coverage report](https://monash.docs.ligo.org/tupak/coverage_badge.svg)](
-https://monash.docs.ligo.org/tupak/htmlcov/)
-
-# Tupak
-
-Fulfilling all your gravitational wave dreams.
-
-## Example
-
-To get started with `tupak`, we have a few examples and tutorials:
-
-1. [Examples of injecting and recovering data](https://git.ligo.org/Monash/tupak/tree/master/examples/injection_examples)
-    * [A basic tutorial](https://git.ligo.org/Monash/tupak/blob/master/examples/injection_examples/basic_tutorial.py)
-    * [Create your own source model](https://git.ligo.org/Monash/tupak/blob/master/examples/injection_examples/create_your_own_source_model.py)
-    * [Create your own time-domain source model](https://git.ligo.org/Monash/tupak/blob/master/examples/injection_examples/create_your_own_time_domain_source_model.py)
-    * [How to specify the prior](https://git.ligo.org/Monash/tupak/blob/master/examples/injection_examples/how_to_specify_the_prior.py)
-    * [Using a partially marginalized likelihood](https://git.ligo.org/Monash/tupak/blob/master/examples/injection_examples/marginalized_likelihood.py)
-
-2. [Examples using open data](https://git.ligo.org/Monash/tupak/tree/master/examples/open_data_examples)
-    * [Analysing the first Binary Black hole detection, GW150914](https://git.ligo.org/Monash/tupak/blob/master/examples/open_data_examples/GW150914.py)
-
-3. [Notebook-style tutorials](https://git.ligo.org/Monash/tupak/tree/master/examples/tutorials)
-    * [Comparing different samplers](https://git.ligo.org/Monash/tupak/blob/master/examples/tutorials/compare_samplers.ipynb)
-    * [Visualising the output](https://git.ligo.org/Monash/tupak/blob/master/examples/tutorials/visualising_the_results.ipynb)
-
-
-## Installation
-
-`tupak` is developed to work with both Python 2.7+ and Python 3+. In the
-following, we assume you have a working python installation, [python
-pip](https://packaging.python.org/tutorials/installing-packages/#use-pip-for-installing),
-and [git](https://git-scm.com/).
-
-### Install tupak
-Clone the repository, install the requirements, and then install `tupak`.
-```bash
-$ git clone git@git.ligo.org:Monash/tupak.git
-$ cd tupak/
-$ pip install -r requirements.txt
-$ python setup.py install
-```
-
-Once you have run these steps, you have `tupak` installed. You can now try to
-run the examples. However, for many gravitational-wave related examples you'll
-also need to install `lalsuite`.
-
-### Install lalsuite
-We recommend you install `lalsuite` the simple way:
-
-```bash
-$ pip install lalsuite.
-```
-
-If this doesn't work, or you prefer to, you can also install from source.
-Head to
-[https://git.ligo.org/lscsoft/lalsuite](https://git.ligo.org/lscsoft/lalsuite)
-to check you have an account and SSH keys set up. Then,
-
-```bash
-$ git lfs install # you may need to install git-lfs first
-$ git clone git@git.ligo.org:lscsoft/lalsuite.git
-$ cd lalsuite
-$ ./00boot
-$ ./configure --prefix=${HOME}/lalsuite-install --disable-all-lal --enable-swig  --enable-lalsimulation
-$ make; make install
-```
-
-Warning: in the configure line here, we have disabled everything except
-lalsimulation. If you need other modules, see `./configure --help`.
-
-### Install pymultinest
-
-If you want to use the `pymultinest` sampler, you first need the
-MultiNest library to be installed to work properly. The full instructions can
-be found [here](https://johannesbuchner.github.io/PyMultiNest/install.html). We
-have also written [a shortened tl;dr here](./TLDR_MULTINEST.md).
-
-
-## Tests and coverage
-
-We have a variety of tests which can be found in the `tests` directory.  You
-can find a [current coverage report for master
-here.](https://monash.docs.ligo.org/tupak/htmlcov/).
-
-

requirements.txt

-future
-dynesty
-corner
-numpy>=1.9
-matplotlib>=2.0
-scipy
-gwpy
-pandas
-astropy
-pymultinest
-gwsurrogate
-NRSur7dq2
-nestle
-deepdish
-ptemcee
-mock

setup.py

-#!/usr/bin/env python
-
-from distutils.core import setup
-import subprocess
-
-# Write a version file containing the git hash and info
-try:
-    git_log = subprocess.check_output(
-        ['git', 'log', '-1', '--pretty=%h %ai']).decode('utf-8')
-    git_diff = (subprocess.check_output(['git', 'diff', '.'])
-                + subprocess.check_output(
-                    ['git', 'diff', '--cached', '.'])).decode('utf-8')
-    if git_diff == '':
-        status = '(CLEAN) ' + git_log
-    else:
-        status = '(UNCLEAN) ' + git_log
-except subprocess.CalledProcessError:
-    status = "NO VERSION INFORMATION"
-
-version_file = '.version'
-with open('tupak/' + version_file, 'w+') as f:
-    f.write(status)
-
-
-setup(name='tupak',
-      version='0.1',
-      packages=['tupak'],
-      package_dir={'tupak': 'tupak'},
-      package_data={'tupak': ['noise_curves/*.txt', 'prior_files/*.txt',
-                              version_file]}
-      )

tupak/__init__.py

@@ -9,7 +9,7 @@ FILL IN THE REST
 """
 
 
-from __future__ import print_function, division
+from __future__ import print_function, division, absolute_import
 
 # import local files, utils should be imported first
 from . import utils