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lscsoft
bilby
Commits
6be834f2
Commit
6be834f2
authored
Jun 08, 2018
by
Colm Talbot
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fix evidence storage and printing when noise evidence is nan
parent
0489e6d4
Pipeline
#21522
passed with stages
in 15 minutes and 14 seconds
Changes
2
Pipelines
1
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2 changed files
with
16 additions
and
9 deletions
+16
-9
tupak/core/result.py
tupak/core/result.py
+12
-7
tupak/core/sampler.py
tupak/core/sampler.py
+4
-2
No files found.
tupak/core/result.py
View file @
6be834f2
...
...
@@ -54,13 +54,18 @@ class Result(dict):
def
__repr__
(
self
):
"""Print a summary """
if
hasattr
(
self
,
'samples'
):
return
(
"nsamples: {:d}
\n
"
"log_noise_evidence: {:6.3f}
\n
"
"log_evidence: {:6.3f} +/- {:6.3f}
\n
"
"log_bayes_factor: {:6.3f} +/- {:6.3f}
\n
"
.
format
(
len
(
self
.
samples
),
self
.
log_noise_evidence
,
self
.
log_evidence
,
self
.
log_evidence_err
,
self
.
log_bayes_factor
,
self
.
log_evidence_err
))
if
hasattr
(
self
,
'log_noise_evidence'
):
return
(
"nsamples: {:d}
\n
"
"log_noise_evidence: {:6.3f}
\n
"
"log_evidence: {:6.3f} +/- {:6.3f}
\n
"
"log_bayes_factor: {:6.3f} +/- {:6.3f}
\n
"
.
format
(
len
(
self
.
samples
),
self
.
log_noise_evidence
,
self
.
log_evidence
,
self
.
log_evidence_err
,
self
.
log_bayes_factor
,
self
.
log_evidence_err
))
else
:
return
(
"nsamples: {:d}
\n
"
"log_evidence: {:6.3f} +/- {:6.3f}
\n
"
.
format
(
len
(
self
.
samples
),
self
.
log_evidence
,
self
.
log_evidence_err
))
else
:
return
''
...
...
tupak/core/sampler.py
View file @
6be834f2
...
...
@@ -574,12 +574,14 @@ def run_sampler(likelihood, priors=None, label='label', outdir='outdir',
else
:
result
=
sampler
.
_run_external_sampler
()
result
.
log_noise_evidence
=
likelihood
.
noise_log_likelihood
()
if
sampler
.
use_ratio
:
result
.
log_noise_evidence
=
likelihood
.
noise_log_likelihood
()
result
.
log_bayes_factor
=
result
.
log_evidence
result
.
log_evidence
=
result
.
log_bayes_factor
+
result
.
log_noise_evidence
else
:
result
.
log_bayes_factor
=
result
.
log_evidence
-
result
.
log_noise_evidence
if
likelihood
.
noise_log_likelihood
()
is
not
np
.
nan
:
result
.
log_noise_evidence
=
likelihood
.
noise_log_likelihood
()
result
.
log_bayes_factor
=
result
.
log_evidence
-
result
.
log_noise_evidence
if
injection_parameters
is
not
None
:
result
.
injection_parameters
=
injection_parameters
if
conversion_function
is
not
None
:
...
...
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