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lscsoft
bilby
Commits
77a12619
Commit
77a12619
authored
6 years ago
by
Moritz Huebner
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Moritz Huebner: Implemented __repr__ for all subclasses
parent
9580ad16
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1 changed file
tupak/prior.py
+28
-10
28 additions, 10 deletions
tupak/prior.py
with
28 additions
and
10 deletions
tupak/prior.py
+
28
−
10
View file @
77a12619
...
...
@@ -166,6 +166,9 @@ class DeltaFunction(Prior):
else
:
return
0
def
__repr__
(
self
,
subclass_keys
=
list
(
tuple
(
'
peak
'
)),
subclass_names
=
list
(
tuple
(
'
peak
'
))):
return
Prior
.
__repr__
(
self
,
subclass_keys
=
subclass_keys
,
subclass_names
=
subclass_names
)
class
PowerLaw
(
Prior
):
"""
Power law prior distribution
"""
...
...
@@ -203,6 +206,9 @@ class PowerLaw(Prior):
-
self
.
minimum
**
(
1
+
self
.
alpha
))
return
self
.
alpha
*
np
.
log
(
val
)
*
np
.
log
(
normalising
)
*
in_prior
def
__repr__
(
self
,
subclass_keys
=
list
(
tuple
(
'
alpha
'
)),
subclass_names
=
list
(
tuple
(
'
alpha
'
))):
return
Prior
.
__repr__
(
self
,
subclass_keys
=
subclass_keys
,
subclass_names
=
subclass_names
)
class
Uniform
(
PowerLaw
):
"""
Uniform prior
"""
...
...
@@ -211,6 +217,9 @@ class Uniform(PowerLaw):
Prior
.
__init__
(
self
,
name
,
latex_label
,
minimum
,
maximum
)
self
.
alpha
=
0
def
__repr__
(
self
,
subclass_keys
=
list
(),
subclass_names
=
list
()):
return
PowerLaw
.
__repr__
(
self
)
class
LogUniform
(
PowerLaw
):
"""
Uniform prior
"""
...
...
@@ -221,6 +230,9 @@ class LogUniform(PowerLaw):
if
self
.
minimum
<=
0
:
logging
.
warning
(
'
You specified a uniform-in-log prior with minimum={}
'
.
format
(
self
.
minimum
))
def
__repr__
(
self
,
subclass_keys
=
list
(),
subclass_names
=
list
()):
return
PowerLaw
.
__repr__
(
self
)
class
Cosine
(
Prior
):
...
...
@@ -241,6 +253,9 @@ class Cosine(Prior):
in_prior
=
(
val
>=
self
.
minimum
)
&
(
val
<=
self
.
maximum
)
return
np
.
cos
(
val
)
/
2
*
in_prior
def
__repr__
(
self
,
subclass_keys
=
list
(),
subclass_names
=
list
()):
return
Prior
.
__repr__
(
self
)
class
Sine
(
Prior
):
...
...
@@ -261,6 +276,9 @@ class Sine(Prior):
in_prior
=
(
val
>=
self
.
minimum
)
&
(
val
<=
self
.
maximum
)
return
np
.
sin
(
val
)
/
2
*
in_prior
def
__repr__
(
self
,
subclass_keys
=
list
(),
subclass_names
=
list
()):
return
Prior
.
__repr__
(
self
)
class
Gaussian
(
Prior
):
"""
Gaussian prior
"""
...
...
@@ -287,6 +305,9 @@ class Gaussian(Prior):
def
lnprob
(
self
,
val
):
return
-
0.5
*
((
self
.
mu
-
val
)
**
2
/
self
.
sigma
**
2
+
np
.
log
(
2
*
np
.
pi
*
self
.
sigma
**
2
))
def
__repr__
(
self
,
subclass_keys
=
list
((
'
mu
'
,
'
sigma
'
)),
subclass_names
=
list
((
'
mu
'
,
'
sigma
'
))):
return
Prior
.
__repr__
(
self
,
subclass_keys
=
subclass_keys
,
subclass_names
=
subclass_names
)
class
TruncatedGaussian
(
Prior
):
"""
...
...
@@ -322,6 +343,9 @@ class TruncatedGaussian(Prior):
return
np
.
exp
(
-
(
self
.
mu
-
val
)
**
2
/
(
2
*
self
.
sigma
**
2
))
/
(
2
*
np
.
pi
)
**
0.5
/
self
.
sigma
/
self
.
normalisation
*
in_prior
def
__repr__
(
self
,
subclass_keys
=
list
((
'
mu
'
,
'
sigma
'
)),
subclass_names
=
list
((
'
mu
'
,
'
sigma
'
))):
return
Prior
.
__repr__
(
self
,
subclass_keys
=
subclass_keys
,
subclass_names
=
subclass_names
)
class
Interped
(
Prior
):
...
...
@@ -353,9 +377,6 @@ class Interped(Prior):
def
__repr__
(
self
,
subclass_keys
=
list
((
'
xx
'
,
'
yy
'
)),
subclass_names
=
list
((
'
xx
'
,
'
yy
'
))):
return
Prior
.
__repr__
(
self
,
subclass_keys
=
subclass_keys
,
subclass_names
=
subclass_names
)
# super_repr = Prior.__repr__(self).rstrip(')').__add__(', ')
# args = Prior.repr_format_helper(self, keys=['xx', 'yy'], names=['xx', 'yy'])
# return super_repr + args + ")"
@property
def
minimum
(
self
):
...
...
@@ -408,13 +429,8 @@ class FromFile(Interped):
logging
.
warning
(
"
Format should be:
"
)
logging
.
warning
(
r
"
x\tp(x)
"
)
def
__repr__
(
self
):
prior_name
=
self
.
__class__
.
__name__
prior_args
=
'
,
'
.
join
(
[
'
{}={}
'
.
format
(
name
,
self
.
__dict__
[
key
])
for
key
,
name
in
zip
([
'
id
'
,
'
_Interped__minimum
'
,
'
_Interped__maximum
'
,
'
name
'
,
'
_Prior__latex_label
'
],
[
'
id
'
,
'
minimum
'
,
'
maximum
'
,
'
name
'
,
'
latex_label
'
])])
return
"
{}({})
"
.
format
(
prior_name
,
prior_args
)
def
__repr__
(
self
,
subclass_keys
=
list
(),
subclass_names
=
list
()):
return
Interped
.
__repr__
(
self
)
class
UniformComovingVolume
(
FromFile
):
...
...
@@ -423,6 +439,8 @@ class UniformComovingVolume(FromFile):
FromFile
.
__init__
(
self
,
file_name
=
'
comoving.txt
'
,
minimum
=
minimum
,
maximum
=
maximum
,
name
=
name
,
latex_label
=
latex_label
)
def
__repr__
(
self
,
subclass_keys
=
list
(),
subclass_names
=
list
()):
return
FromFile
.
__repr__
(
self
)
def
create_default_prior
(
name
):
"""
...
...
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