Cannot resume analyses with nessai with transfer-files=True
After the recent change to preserve relative paths, resuming with nessai when transfer-files=True
is now broken. This seems to be caused by issues with how subdirectories are handled. It's not clear to me if this is an issue with bilby_pipe, nessai or condor, so I've reported the issue here: https://git.ligo.org/computing/helpdesk/-/issues/3260 and provided a simple example to replicate the problem.
Possible fixes to this could include reverting the change to preserved relative paths or hard coding extra paths for nessai. The latter will work in most case, but nessai generates some directories dynamically, so these won't always be used.