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Update documentation configuration to run things internally

Duncan Macleod requested to merge duncanmmacleod/pesummary:docs-public-release-internal into master

This MR modifies the documentation configuration to generate all files internal to the sphinx process, without relying on externally created files that aren't part of the normal python build.

This is a pre-requisite to generating documentation on readthedocs, for example.

Edited by Duncan Macleod

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