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Cherry pick commits to fix background generation

!25 (merged) introduced some issues which had previously been fixed by @qi-chu in branch max_snr_point

There were 4 relevant commits which I've cherry-picked (the others were new features and fixes to those features) The first 3 are direct fixes, the 4th is a small refactors/fixes to debug output.

I've edited a couple of the commits during the cherry pick merge, and made done some refactoring.

Edited by Timothy Davies

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