Skip to content
GitLab
Explore
Sign in
Primary navigation
Search or go to…
Project
GraceDB Server
Manage
Activity
Members
Labels
Plan
Issues
Issue boards
Milestones
Requirements
Code
Merge requests
Repository
Branches
Commits
Tags
Repository graph
Compare revisions
Locked files
Build
Pipelines
Jobs
Pipeline schedules
Test cases
Artifacts
Deploy
Releases
Package Registry
Container Registry
Model registry
Operate
Environments
Terraform modules
Monitor
Incidents
Service Desk
Analyze
Value stream analytics
Contributor analytics
CI/CD analytics
Repository analytics
Code review analytics
Issue analytics
Insights
Model experiments
Help
Help
Support
GitLab documentation
Compare GitLab plans
Community forum
Contribute to GitLab
Provide feedback
Keyboard shortcuts
?
Snippets
Groups
Projects
Show more breadcrumbs
Michael William Coughlin
GraceDB Server
Commits
15997c8c
Commit
15997c8c
authored
5 years ago
by
Tanner Prestegard
Committed by
GraceDB
5 years ago
Browse files
Options
Downloads
Patches
Plain Diff
Minor search backend enhancements
parent
ffa70e62
No related branches found
Branches containing commit
No related tags found
Tags containing commit
No related merge requests found
Changes
3
Hide whitespace changes
Inline
Side-by-side
Showing
3 changed files
gracedb/search/query/events.py
+4
-4
4 additions, 4 deletions
gracedb/search/query/events.py
gracedb/search/query/labels.py
+3
-3
3 additions, 3 deletions
gracedb/search/query/labels.py
gracedb/search/query/superevents.py
+30
-14
30 additions, 14 deletions
gracedb/search/query/superevents.py
with
37 additions
and
21 deletions
gracedb/search/query/events.py
+
4
−
4
View file @
15997c8c
...
...
@@ -22,7 +22,7 @@ from django.db.models.query import QuerySet
# (weak) natural language time parsing.
from
events.nltime
import
nlTimeExpression
as
nltime_
nltime
=
nltime_
.
setParseAction
(
lambda
toks
:
toks
[
"
calculatedTime
"
])
from
events.models
import
Group
,
Pipeline
,
Search
,
Label
from
events.models
import
Group
,
Pipeline
,
Search
from
.labels
import
getLabelQ
from
.superevents
import
parse_superevent_id
,
superevent_expr
from
..constants
import
RUN_MAP
,
ExpressionOperator
...
...
@@ -252,7 +252,7 @@ def parseQuery(s):
# Analysis Groups
# XXX Querying the database at module compile time is a bad idea!
# See: https://docs.djangoproject.com/en/1.8/topics/testing/overview/
groupNames
=
[
group
.
name
for
group
in
Group
.
objects
.
al
l
()]
groupNames
=
list
(
Group
.
objects
.
v
al
ues_list
(
'
name
'
,
flat
=
True
))
group
=
Or
(
map
(
CaselessLiteral
,
groupNames
)).
setName
(
"
analysis group name
"
)
#groupList = delimitedList(group, delim='|').setName("analysis group list")
groupList
=
OneOrMore
(
group
).
setName
(
"
analysis group list
"
)
...
...
@@ -261,7 +261,7 @@ def parseQuery(s):
Q
(
group__name__in
=
toks
.
asList
())))
# Pipeline
pipelineNames
=
[
pipeline
.
name
for
pipeline
in
Pipeline
.
objects
.
al
l
()]
pipelineNames
=
list
(
Pipeline
.
objects
.
v
al
ues_list
(
'
name
'
,
flat
=
True
))
pipeline
=
Or
(
map
(
CaselessLiteral
,
pipelineNames
)).
setName
(
"
pipeline name
"
)
pipelineList
=
OneOrMore
(
pipeline
).
setName
(
"
pipeline list
"
)
pipelineQ
=
(
Optional
(
Suppress
(
Keyword
(
"
pipeline:
"
)))
+
pipelineList
)
...
...
@@ -269,7 +269,7 @@ def parseQuery(s):
Q
(
pipeline__name__in
=
toks
.
asList
())))
# Search
searchNames
=
[
search
.
name
for
search
in
Search
.
objects
.
al
l
()]
searchNames
=
list
(
Search
.
objects
.
v
al
ues_list
(
'
name
'
,
flat
=
True
))
search
=
Or
(
map
(
CaselessLiteral
,
searchNames
)).
setName
(
"
search name
"
)
# XXX Branson: The change below was made 2/17/15 to fix a bug in which
# searches like 'grbevent.ra > 0' failed due to the 'grb' being peeled off
...
...
This diff is collapsed.
Click to expand it.
gracedb/search/query/labels.py
+
3
−
3
View file @
15997c8c
...
...
@@ -18,7 +18,7 @@ def getLabelQ():
# Note the parse action for labelQ: Replace all tokens with the empty
# string. This basically has the effect of removing any label query terms
# from the query string.
labelNames
=
[
l
.
name
for
l
in
Label
.
objects
.
al
l
()]
labelNames
=
list
(
Label
.
objects
.
v
al
ues_list
(
'
name
'
,
flat
=
True
))
#label = Or([CaselessLiteral(n) for n in labelNames]).\
label
=
Or
([
CaselessKeyword
(
n
)
for
n
in
labelNames
]).
\
setParseAction
(
lambda
toks
:
Q
(
labels__name
=
toks
[
0
])
)
...
...
@@ -39,7 +39,7 @@ def getLabelQ():
# as a list of Q objects and separators.
#--------------------------------------------------------------------------
def
labelQuery
(
s
,
names
=
False
):
labelNames
=
[
l
.
name
for
l
in
Label
.
objects
.
al
l
()]
labelNames
=
list
(
Label
.
objects
.
v
al
ues_list
(
'
name
'
,
flat
=
True
))
#label = Or([CaselessLiteral(n) for n in labelNames])
label
=
Or
([
CaselessKeyword
(
n
)
for
n
in
labelNames
])
# If the filter objects are going to be applied to Lable
...
...
@@ -66,7 +66,7 @@ def labelQuery(s, names=False):
# The following version is used only for validation. Just to check that
# the query strictly conforms to the requirements of a label query.
def
parseLabelQuery
(
s
):
labelNames
=
[
l
.
name
for
l
in
Label
.
objects
.
al
l
()]
labelNames
=
list
(
Label
.
objects
.
v
al
ues_list
(
'
name
'
,
flat
=
True
))
#label = Or([CaselessLiteral(n) for n in labelNames])
label
=
Or
([
CaselessKeyword
(
n
)
for
n
in
labelNames
])
andop
=
oneOf
(
"
, &
"
)
...
...
This diff is collapsed.
Click to expand it.
gracedb/search/query/superevents.py
+
30
−
14
View file @
15997c8c
...
...
@@ -3,11 +3,11 @@ import datetime
import
logging
import
pytz
from
django.conf
import
settings
from
django.db.models
import
Q
from
django.db.models.query
import
QuerySet
from
core.utils
import
letters_to_int
,
int_to_letters
from
events.models
import
Group
,
Pipeline
,
Search
,
Label
# (weak) natural language time parsing.
from
events.nltime
import
nlTimeExpression
as
nltime_
from
superevents.models
import
Superevent
...
...
@@ -19,7 +19,7 @@ from pyparsing import Word, nums, Literal, CaselessLiteral, delimitedList, \
Suppress
,
QuotedString
,
Keyword
,
Combine
,
Or
,
Optional
,
OneOrMore
,
\
ZeroOrMore
,
alphas
,
alphanums
,
Regex
,
opAssoc
,
operatorPrecedence
,
\
oneOf
,
stringStart
,
stringEnd
,
FollowedBy
,
ParseResults
,
ParseException
,
\
CaselessKeyword
,
pyparsing_common
CaselessKeyword
,
pyparsing_common
,
tokenMap
# Set up logger
logger
=
logging
.
getLogger
(
__name__
)
...
...
@@ -37,9 +37,23 @@ def parse_superevent_id(name, toks, filter_prefix=None):
if
(
toks
.
prefix
==
Superevent
.
GW_ID_PREFIX
):
toks
.
suffix
=
toks
.
suffix
.
upper
()
# Combine into full ID
,
get lookup kwargs
and convert to a Q object
# Combine into full ID
and
get lookup kwargs
s_id
=
toks
.
preprefix
+
toks
.
prefix
+
toks
.
date
+
toks
.
suffix
f_kwargs
=
Superevent
.
get_filter_kwargs_for_date_id_lookup
(
s_id
)
# Add any necessary prefix. For example, if we want to look up events
# that are part of a given superevent, we have to add the 'superevent__'
# prefix to the filter kwargs.
if
filter_prefix
:
# Add '__' to end of filter_prefix
if
not
filter_prefix
.
endswith
(
'
__
'
):
filter_prefix
+=
'
__
'
f_kwargs
=
{
'
{pref}{k}
'
.
format
(
pref
=
filter_prefix
,
k
=
k
):
v
for
k
,
v
in
f_kwargs
.
items
()}
# Convert to a Q object
fullQ
=
Q
(
**
f_kwargs
)
return
(
name
,
fullQ
)
...
...
@@ -80,7 +94,7 @@ parameter_dicts = {
'
t_0
'
:
{
'
keyword
'
:
[
'
t_0
'
,
'
gpstime
'
],
'
keywordOptional
'
:
True
,
'
value
'
:
pyparsing_common
.
number
,
'
value
'
:
pyparsing_common
.
number
.
copy
()
,
'
doRange
'
:
True
,
'
parseAction
'
:
maybeRange
(
'
t_0
'
),
},
...
...
@@ -88,7 +102,7 @@ parameter_dicts = {
'
t_start
'
:
{
'
keyword
'
:
'
t_start
'
,
'
keywordOptional
'
:
False
,
'
value
'
:
pyparsing_common
.
number
,
'
value
'
:
pyparsing_common
.
number
.
copy
()
,
'
doRange
'
:
True
,
'
parseAction
'
:
maybeRange
(
'
t_start
'
),
},
...
...
@@ -96,7 +110,7 @@ parameter_dicts = {
'
t_end
'
:
{
'
keyword
'
:
'
t_end
'
,
'
keywordOptional
'
:
False
,
'
value
'
:
pyparsing_common
.
number
,
'
value
'
:
pyparsing_common
.
number
.
copy
()
,
'
doRange
'
:
True
,
'
parseAction
'
:
maybeRange
(
'
t_end
'
),
},
...
...
@@ -113,16 +127,18 @@ parameter_dicts = {
'
preferred_event
'
:
{
'
keyword
'
:
'
preferred_event
'
,
'
keywordOptional
'
:
False
,
'
value
'
:
Suppress
(
Word
(
"
GHMTghmt
"
,
exact
=
1
))
+
Word
(
nums
),
'
value
'
:
Suppress
(
Word
(
"
GHMTghmt
"
,
exact
=
1
))
+
\
Word
(
nums
).
setParseAction
(
tokenMap
(
int
)),
'
doRange
'
:
True
,
'
parseAction
'
:
maybeRange
(
"
preferred_event
"
,
dbname
=
"
preferred_event__id
"
),
},
# event: G1234, event: G1234 .. G2234
'
event
'
:
{
'
keyword
'
:
'
event
'
,
'
keyword
'
:
[
'
event
'
,
'
events
'
],
'
keywordOptional
'
:
False
,
'
value
'
:
Suppress
(
Word
(
"
EGHMTeghmt
"
,
exact
=
1
))
+
Word
(
nums
),
'
value
'
:
Suppress
(
Word
(
"
EGHMTeghmt
"
,
exact
=
1
))
+
\
Word
(
nums
).
setParseAction
(
tokenMap
(
int
)),
'
doRange
'
:
True
,
'
parseAction
'
:
maybeRange
(
"
event
"
,
dbname
=
"
events__id
"
),
},
...
...
@@ -167,7 +183,8 @@ parameter_dicts = {
Optional
(
Word
(
nums
,
exact
=
2
)
+
Suppress
(
'
:
'
)
+
\
Word
(
nums
,
exact
=
2
)
+
Optional
(
Suppress
(
'
:
'
)
+
\
Word
(
nums
,
exact
=
2
)))).
setParseAction
(
lambda
toks
:
pytz
.
utc
.
localize
(
datetime
.
datetime
(
*
map
(
int
,
toks
)))),
pytz
.
timezone
(
settings
.
TIME_ZONE
).
localize
(
datetime
.
datetime
(
*
map
(
int
,
toks
)))),
'
parseAction
'
:
maybeRange
(
"
created
"
),
},
# test OR category: test
...
...
@@ -185,7 +202,7 @@ parameter_dicts = {
'
far
'
:
{
'
doRange
'
:
False
,
'
value
'
:
Suppress
(
CaselessLiteral
(
'
far
'
))
+
ExpressionOperator
+
\
pyparsing_common
.
number
,
pyparsing_common
.
number
.
copy
()
,
'
parseAction
'
:
lambda
toks
:
(
"
far
"
,
Q
(
**
{
'
preferred_event__far
'
+
toks
[
0
]:
toks
[
1
]})),
},
...
...
@@ -194,9 +211,9 @@ parameter_dicts = {
'
doRange
'
:
False
,
'
value
'
:
Suppress
(
CaselessLiteral
(
'
far
'
))
+
\
Suppress
(
Or
([
CaselessLiteral
(
d
)
for
d
in
[
'
in
'
,
'
:
'
]]))
+
\
pyparsing_common
.
number
+
\
pyparsing_common
.
number
.
copy
()
+
\
Suppress
(
Or
([
CaselessLiteral
(
op
)
for
op
in
[
'
,
'
,
'
..
'
,
'
-
'
]]))
+
\
pyparsing_common
.
number
,
pyparsing_common
.
number
.
copy
()
,
'
parseAction
'
:
lambda
toks
:
(
"
far_range
"
,
Q
(
**
{
'
preferred_event__far__range
'
:
toks
.
asList
()})),
},
...
...
@@ -272,4 +289,3 @@ def parseSupereventQuery(s):
matches
.
append
((
'
category
'
,
default_Q
))
return
reduce
(
Q
.
__and__
,
[
m
[
1
]
for
m
in
matches
],
Q
())
This diff is collapsed.
Click to expand it.
Preview
0%
Loading
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Save comment
Cancel
Please
register
or
sign in
to comment