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Update ci

Colm Talbot requested to merge colm.talbot/stochastic_lite:update-ci into master

Hi @arianna.renzini (and others) I started looking at the code coverage and noticed some issues with the CI/setup script.

This should fix those issues, the code coverage (the fraction of lines tested in the unit tests) is now reported by the CI.

I did hike the minimum python version in line with the numpy deprecation schedule. Since it's still early days for this project, I think it's worth taking a somewhat hard line on it.

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