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Commit a97888e9 authored by Gregory Ashton's avatar Gregory Ashton
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Add example of adding responses

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#!/bin/python
"""
An example of running two sets of posterior sample estimations and adding them
"""
from __future__ import division
import tupak
import numpy as np
outdir = 'outdir'
def model(time, m, c):
return time * m + c
injection_parameters = dict(m=0.5, c=0.2)
sigma = 1
sampling_frequency = 10
time_duration = 10
time = np.arange(0, time_duration, 1/sampling_frequency)
N = len(time)
data = model(time, **injection_parameters) + np.random.normal(0, sigma, N)
likelihood = tupak.core.likelihood.GaussianLikelihood(
time, data, model, sigma=sigma)
priors = {}
priors['m'] = tupak.core.prior.Uniform(0, 1, 'm')
priors['c'] = tupak.core.prior.Uniform(-2, 2, 'c')
resultA = tupak.run_sampler(
likelihood=likelihood, priors=priors, sampler='emcee', nsteps=1000,
nburn=500, outdir=outdir, label='A')
resultB = tupak.run_sampler(
likelihood=likelihood, priors=priors, sampler='emcee', nsteps=1000,
nburn=500, outdir=outdir, label='B')
resultA.plot_walkers()
result = resultA + resultB
result.plot_corner()
print(result)
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