Merge branch 'build-with-cmake' into 'master'

Build with cmake See merge request lscsoft/bayeswave!118

Merge branch 'build-with-cmake' into 'master'
48cad22c · James Alexander Clark PhD · 0e3f279f · 874e0f9b · 48cad22c · 48cad22c
Commit 48cad22c authored 5 years ago by James Alexander Clark PhD
--- a/.gitignore
+++ b/.gitignore
@@ -16,6 +16,8 @@ BayesWave
 BayesWaveCleanFrame
 BayesWavePost
 BayesWaveToLALPSD
+src/version.h
+src/bayeswave.pc
 # autotools stuff
 .libs/
@@ -31,7 +33,9 @@ configure
 libtool
 Makefile
 Makefile.in
+bayeswave.spec
 # docs stuff
 doc/_build
 doc/index.rst
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -4,7 +4,7 @@ variables:
  NIGHTLY: $CI_REGISTRY_IMAGE:nightly
  TAG: $CI_REGISTRY_IMAGE:$CI_COMMIT_TAG
  BUILD_DIR: test-install
-  BUILD_TARGET: ${CI_PROJECT_DIR}/${BUILD_DIR}
+  BUILD_TARGET: $CI_PROJECT_DIR/$BUILD_DIR
  TEST_OUTPUT: test-output
 stages:
@@ -16,59 +16,61 @@ stages:
 build-env:
  stage: build
  script:
-    - mkdir -p ${BUILD_TARGET}
+    - mkdir -p $BUILD_TARGET
-    - sed "s|INSTALL_DIR|${BUILD_DIR}|g" ${CI_PROJECT_DIR}/etc/bayeswave-user-env.sh > ${BUILD_TARGET}/bayeswave-user-env.sh
+    - sed "s|INSTALL_DIR|$BUILD_DIR|g" $CI_PROJECT_DIR/etc/bayeswave-user-env.sh > $BUILD_TARGET/bayeswave-user-env.sh
  artifacts:
    paths:
-      - ${BUILD_DIR}
+      - $BUILD_DIR
 build-bayeswave:
  stage: build
-  image: ligo/software:stretch
+  image: ligo/software:el7
  script:
-    - pushd ${CI_PROJECT_DIR}/src
+    - pushd $CI_PROJECT_DIR
-    - autoreconf --verbose --force --install --make
+    - mkdir -p build
-    - ./configure --prefix ${BUILD_TARGET} CFLAGS="-Wno-format-truncation -g -O3"
+    - cmake3 . -DCMAKE_BUILD_TYPE=Debug -DCMAKE_EXPORT_COMPILE_COMMANDS=true -DCMAKE_INSTALL_PREFIX=$BUILD_DIR
-    - make 
+    - cmake3 --build . -- VERBOSE=1
-    - make install
+    - cmake3 --build . --target install
    - popd
  artifacts:
    paths:
-      - ${BUILD_DIR}
+      - $BUILD_DIR
 build-BayesWaveUtils:
  stage: build
-  image: ligo/software:stretch
+  image: ligo/software:el7
  script: 
    - pushd BayesWaveUtils
-    - python setup.py install --prefix ${BUILD_TARGET}
+    - python setup.py install --prefix $BUILD_TARGET
    - popd
  artifacts:
    paths:
-      - ${BUILD_DIR}
+      - $BUILD_DIR
 # FIXME: including the full commandline here is illustrative.  We have a test
 # script in the repository that does the same thing.
 test:BayesWave:
  stage: test
-  image: ligo/software:stretch
+  image: ligo/software:el7
  script:
-    - source ${BUILD_DIR}/bayeswave-user-env.sh
+    - source $BUILD_DIR/bayeswave-user-env.sh
+    - cat $BUILD_DIR/bayeswave-user-env.sh
+    - ls -R $BUILD_DIR 
    - BayesWave --help
    - "BayesWave --ifo H1 --H1-flow 32 \
      --H1-cache LALSimAdLIGO --H1-channel LALSimAdLIGO \
      --trigtime 900000000.00 --srate 512 --seglen 4 --PSDstart 900000000 \
      --PSDlength 1024 --NCmin 2 --NCmax 2 --dataseed 1234 \
-      --Niter 500 --outputDir ${TEST_OUTPUT}"
+      --Niter 500 --outputDir $TEST_OUTPUT"
  dependencies:
    - build-env
    - build-bayeswave
 test:BayesWavePost:
  stage: test
-  image: ligo/software:stretch
+  image: ligo/software:el7
  script:
-    - source ${BUILD_DIR}/bayeswave-user-env.sh
+    - source $BUILD_DIR/bayeswave-user-env.sh
    - BayesWavePost --help
  dependencies:
    - build-env
@@ -76,15 +78,24 @@ test:BayesWavePost:
 test:bayeswave_pipe:
  stage: test
-  image: ligo/software:stretch
+  image: ligo/software:el7
  script:
-    - ls ${BUILD_DIR}
+    - ls $BUILD_DIR
-    - source ${BUILD_DIR}/bayeswave-user-env.sh
+    - source $BUILD_DIR/bayeswave-user-env.sh
    - bayeswave_pipe --help
  dependencies:
    - build-env
    - build-BayesWaveUtils
+test:docker:
+  stage: test
+  image: docker:latest
+  before_script:
+    - docker login -u gitlab-ci-token -p $CI_BUILD_TOKEN $CI_REGISTRY
+  script:
+    - docker build --pull -t $CI_REGISTRY_IMAGE:latest --file Dockerfile .
+    - docker run $CI_REGISTRY_IMAGE:latest /test-bayeswave.sh
 # FIXME: Add a proper test stage for the docker images
 docker:latest:
@@ -97,7 +108,6 @@ docker:latest:
    - docker login -u gitlab-ci-token -p $CI_BUILD_TOKEN $CI_REGISTRY
  script:
    - docker build --pull -t $CI_REGISTRY_IMAGE:latest --file Dockerfile .
-    - docker run -u $(id -u):$(id -g) $CI_REGISTRY_IMAGE:latest "/opt/lscsoft/bayeswave/test/test-bayeswave.sh"
    - docker push $CI_REGISTRY_IMAGE:latest
@@ -111,7 +121,6 @@ docker:tags:
    - docker login -u gitlab-ci-token -p $CI_BUILD_TOKEN $CI_REGISTRY
  script:
    - docker build --pull -t $CI_REGISTRY_IMAGE:$CI_COMMIT_TAG --file Dockerfile .
-    - docker run -u $(id -u):$(id -g) $CI_REGISTRY_IMAGE:$CI_COMMIT_TAG "/opt/lscsoft/bayeswave/test/test-bayeswave.sh"
    - docker push $CI_REGISTRY_IMAGE:$CI_COMMIT_TAG
 docs:
@@ -124,7 +133,7 @@ docs:
    - apt-get -yqq update
    - apt-get -yqq install curl
    - curl --location --output pandoc.deb https://github.com/jgm/pandoc/releases/download/2.7.2/pandoc-2.7.2-1-amd64.deb
-    - dpkg --install pandoc.deb || { apt-get -y -f install; dpkg --install pandoc.deb; }
+    - dpkg --install pandoc.deb ||  apt-get -y -f install; dpkg --install pandoc.deb; 
    # install python dependencies
    - python3 -m pip install -r doc/requirements.txt
  script:

--- a/CMakeLists.txt
+++ b/CMakeLists.txt
+#
+# CMake packaging for BayesWave
+# Copyright 2019  James Alexander Clark <james.clark@ligo.org>
+# Based on CMake packaging for libframe & Frv by Duncan MacLeod <duncan.macleod@ligo.org>
+#
+# -- package info -----------
+cmake_minimum_required(VERSION 3.12.0 FATAL_ERROR)
+project(
+    bayeswave
+    LANGUAGES C
+    VERSION 1.0.3
+    DESCRIPTION "LIGO/VIRGO burst analysis algorithm"
+    HOMEPAGE_URL "https://git.ligo.org/lscsoft/bayeswave"
+)
+include(GNUInstallDirs)
+include(CheckFunctionExists)
+find_package(PkgConfig)
+find_package(Git)
+# -- build components -------
+# C library | enable/disable with -DENABLE_C={yes,no} (default yes)
+add_subdirectory(src)
+#add_subdirectory(doc)
+# -- packaging components ---
+set(SPEC_IN "${CMAKE_CURRENT_SOURCE_DIR}/bayeswave.spec.in")
+set(SPEC    "${CMAKE_CURRENT_SOURCE_DIR}/bayeswave.spec")
+configure_file(${SPEC_IN} ${SPEC} @ONLY)
+# -- build tarball ----------
+#
+# to build a source tarball:
+#
+# mkdir dist
+# pushd dist
+# cmake ..
+# cmake --build . --target package_source
+#
+set(CPACK_PACKAGE_MAJOR ${${PROJECT_NAME}_MAJOR_VERSION})
+set(CPACK_PACKAGE_MINOR ${${PROJECT_NAME}_MINOR_VERSION})
+set(CPACK_PACKAGE_PATCH ${${PROJECT_NAME}_PATCH_VERSION})
+set(CPACK_PACKAGE_VERSION "${CPACK_PACKAGE_MAJOR}.${CPACK_PACKAGE_MINOR}.${CPACK_PACKAGE_PATCH}")
+set(CPACK_SOURCE_GENERATOR TXZ)
+set(CPACK_SOURCE_PACKAGE_FILE_NAME ${PROJECT_NAME}-${${PROJECT_NAME}_VERSION})
+set(CPACK_SOURCE_IGNORE_FILES
+    "/.*~$/"
+    ".*~$"
+    "\\\\.svn/"
+    "\\\\.git"
+    "build/"
+    "CMakeFiles/"
+    "CMakeCache.txt"
+    "_CPack_Packages/"
+    "\\\\.cmake"
+    "Makefile"
+    "\\\\.deps/"
+    "autom4te.cache/"
+    "\\\\.tar\\\\.xz"
+)
+include(CPack)
--- a/Dockerfile
+++ b/Dockerfile
-FROM containers.ligo.org/lscsoft/lalsuite/lalsuite-v6.53:stretch
+FROM containers.ligo.org/lscsoft/lalsuite/lalsuite-v6.53:el7
 ARG version
 RUN echo "Building bayeswave"
 MAINTAINER James Alexander Clark <james.clark@ligo.org>
-# Dependencies
+RUN yum upgrade -y && \
-RUN apt-get update && apt-get install --assume-yes \
+      yum install -y gcc \
-      build-essential \
+      cmake3 \
-      pkg-config \
+      gcc-c++ \
-      python-pip \
+      help2man \
+      rpm-build \
+      which \
      git \
-      python-ligo-lw
+      python-ligo-lw && \
+      yum clean all && \
+      rm -rf /var/cache/yum
-RUN python -m pip install --upgrade setuptools
+# RUN curl -O https://bootstrap.pypa.io/get-pip.py && \
+#     python get-pip.py && \
+#     rm get-pip.py
 # Copy and build BayesWave
-WORKDIR /
+WORKDIR /tmp
-# This seems very hacky but will get us git verion info in the configure.ac:
+RUN mkdir /tmp/bayeswave
-COPY .git /
+COPY bayeswave.spec.in /tmp/bayeswave
-COPY install.sh /
+COPY .git /tmp/bayeswave
-COPY src /src
+COPY CMakeLists.txt /tmp/bayeswave
-copy etc/bayeswave-user-env.sh /etc/bayeswave-user-env.sh
+COPY src /tmp/bayeswave/src
-COPY BayesWaveUtils /BayesWaveUtils
+COPY etc/bayeswave-user-env.sh /tmp/bayeswave/etc/bayeswave-user-env.sh
-RUN sh install.sh /opt/lscsoft/bayeswave 
+COPY README.md /tmp
-COPY test /opt/lscsoft/bayeswave/test
+COPY BayesWaveUtils /tmp/bayeswave/BayesWaveUtils
-RUN rm -rf .git install.sh /src /BayesWaveUtils /etc/bayeswave-user-env.sh
+ADD test/test-bayeswave.sh /
-RUN mkdir -p /cvmfs /hdfs /hadoop /etc/condor
+# Python Utils
-# BayesWave env
+RUN cd /tmp/bayeswave/BayesWaveUtils && \
-ENV PATH /opt/lscsoft/bayeswave/bin:${PATH}
+      python /tmp/bayeswave/BayesWaveUtils/setup.py install 
-ENV LD_LIBRARY_PATH /opt/lscsoft/bayeswave/lib:${LD_LIBRARY_PATH}
-ENV PYTHONPATH /opt/lscsoft/bayeswave/lib/python2.7/site-packages:${PYTHONPATH}
+RUN mkdir -p ~/rpmbuild/{BUILD,RPMS,SOURCES,SPECS,SRPMS}
+RUN echo '%_topdir %(echo $HOME)/rpmbuild' > ~/.rpmmacros
+RUN mkdir dist && \
+      pushd dist && \
+      cmake3 /tmp/bayeswave && \
+      cmake3 --build . --target package_source && \
+      mv bayeswave-*.tar.xz /root/rpmbuild/SOURCES/ && \
+      popd
+RUN rpmbuild -ba /tmp/bayeswave/bayeswave.spec
+RUN rpm -ivh /root/rpmbuild/RPMS/x86_64/bayeswave-1.0.3-1.el7.x86_64.rpm
+RUN rm -rf .git install.sh /src /BayesWaveUtils /etc/bayeswave-user-env.sh /build.sh /CMakeLists.txt /build
+RUN mkdir -p /cvmfs /hdfs /hadoop /etc/condor /test
+# Clean up
+RUN rm -rf /tmp/* ~/rpmbuild/{BUILD,RPMS,SOURCES,SPECS,SRPMS}
+WORKDIR /
 ENTRYPOINT ["/bin/bash"]

--- a/bayeswave.spec.in
+++ b/bayeswave.spec.in
+Name: @PROJECT_NAME@
+Version: @PROJECT_VERSION@
+Release: 1%{?dist}
+Summary: @PROJECT_DESCRIPTION@
+License: GPLv2
+Source: http://software.ligo.org/lscsoft/source/%{name}-%{version}.tar.xz
+URL: https://git.ligo.org/lscsoft/bayeswave
+Packager: Duncan Macleod <duncan.macleod@ligo.org>
+Prefix: %{_prefix}
+# -- build requires ---------
+BuildRequires: gcc, gcc-c++, glibc
+BuildRequires: cmake3 >= 3.12.0
+BuildRequires: make
+BuildRequires: help2man
+BuildRequires: gsl-devel
+BuildRequires: fftw-devel
+BuildRequires: libframe-devel
+BuildRequires: libmetaio-devel
+BuildRequires: lal-devel
+BuildRequires: lalframe-devel
+BuildRequires: lalmetaio-devel
+BuildRequires: lalsimulation-devel
+BuildRequires: lalinspiral-devel
+BuildRequires: lalinference-devel
+# -- package definitions ----
+%description
+A Bayesian algorithm designed to robustly distinguish gravitational wave
+signals from noise and instrumental glitches without relying on any prior
+assumptions of waveform morphology.  
+BayesWave produces posterior probability distributions directly on
+gravitational wave signals and instrumental glitches, allowing robust,
+morphology-independent waveform reconstruction.
+%package devel
+Summary: Files and documentation needed for compiling bayeswave programs
+Requires: %{name} = %{version}
+%description devel
+A Bayesian algorithm designed to robustly distinguish gravitational wave
+signals from noise and instrumental glitches without relying on any prior
+assumptions of waveform morphology.
+This package contains the files needed for building libframe programs
+# -- build stages -----------
+%prep
+%setup -c -T -D -a 0 -n %{name}-%{version}
+%build
+%cmake3 \
+  -DCMAKE_BUILD_TYPE=Release \
+  %{name}-%{version}
+%make_build
+%install
+%make_install
+# man pages
+mkdir -vp %{buildroot}%{_mandir}/man1
+export LD_LIBRARY_PATH="%{buildroot}%{_libdir}:${LD_LIBRARY_PATH}"
+help2man --source %{name} --version-string %{version} \
+         --section 1 --no-info --no-discard-stderr \
+         --output %{buildroot}%{_mandir}/man1/BayesWave.1 %{buildroot}%{_bindir}/BayesWave
+help2man --source %{name} --version-string %{version} \
+         --section 1 --no-info --no-discard-stderr \
+         --output %{buildroot}%{_mandir}/man1/BayesWaveCleanFrame.1 %{buildroot}%{_bindir}/BayesWaveCleanFrame
+help2man --source %{name} --version-string %{version} \
+         --section 1 --no-info --no-discard-stderr \
+         --output %{buildroot}%{_mandir}/man1/BayesWavePost.1 %{buildroot}%{_bindir}/BayesWavePost
+help2man --source %{name} --version-string %{version} \
+         --section 1 --no-info --no-discard-stderr \
+         --output %{buildroot}%{_mandir}/man1/BayesWaveToLALPSD.1 %{buildroot}%{_bindir}/BayesWaveToLALPSD
+%check
+export LD_LIBRARY_PATH="%{buildroot}%{_libdir}:${LD_LIBRARY_PATH}"
+export PKG_CONFIG_PATH="%{buildroot}%{_libdir}/pkgconfig:${PKG_CONFIG_PATH}"
+# run each executable with no args (equivalent of --help)
+%{buildroot}%{_bindir}/BayesWave
+%{buildroot}%{_bindir}/BayesWaveCleanFrame
+%{buildroot}%{_bindir}/BayesWavePost
+%{buildroot}%{_bindir}/BayesWaveToLALPSD
+# run pkg-config to check metadata
+pkg-config --modversion @PROJECT_NAME@
+%clean
+rm -rf %{buildroot}
+# -- files ------------------
+%files
+%{_bindir}/*
+%{_libdir}/*.so.*
+%{_mandir}/man1/*
+%files devel
+%{_libdir}/*.so
+%{_libdir}/pkgconfig/*
+%{_includedir}/*
+# -- changelog --------------
+# dates should be formatted using: 'date +"%a %b %d %Y"'
+%changelog
+* Thu Jun 6 2019 Duncan Macleod <duncan.macleod@ligo.org> 1.3.0-1
+- Rework packaging for cmake
--- a/build.sh
+++ b/build.sh
+#!/bin/bash
+set -e
+INSTALL_PREFIX=$1
+rm -rf build
+mkdir -p build
+pushd build
+cmake3 .. \
+	-DCMAKE_INSTALL_PREFIX=$INSTALL_PREFIX \
+	-DCMAKE_BUILD_TYPE=Release \
+	-DCMAKE_EXPORT_COMPILE_COMMANDS=true
+cmake3 --build . -- VERBOSE=1
+cmake3 --build . --target install
+popd
--- a/etc/bayeswave-user-env.sh
+++ b/etc/bayeswave-user-env.sh
@@ -14,5 +14,6 @@ pyminor=$(python -c 'import sys; print(sys.version_info[1])')
 # BayesWave
 export PATH=${BAYESWAVE_PREFIX}/bin:${PATH}
 export LD_LIBRARY_PATH=${BAYESWAVE_PREFIX}/lib:${LD_LIBRARY_PATH}
+export LD_LIBRARY_PATH=${BAYESWAVE_PREFIX}/lib64:${LD_LIBRARY_PATH}
 export PYTHONPATH=${BAYESWAVE_PREFIX}/lib/python${pymajor}.${pyminor}/site-packages:${PYTHONPATH}
--- a/install.sh
+++ b/install.sh
@@ -17,6 +17,7 @@
 set -e
 install_dir=${1}
 # Remove trailing slash if present
@@ -31,19 +32,20 @@ echo "Installing to ${install_dir}"
 #
 # Configure and make main executables
 #
-START=${PWD}
+#   START=${PWD}
-cd src
+#   cd src
-autoreconf --verbose --force --install --make
+#   autoreconf --verbose --force --install --make
-./configure --prefix ${install_dir} CFLAGS="-Wno-format-truncation -g -O3"
+#   ./configure --prefix ${install_dir} CFLAGS="-Wno-format-truncation -g -O3"
-make install
+#   make install
-cd ${START}
+#   cd ${START}
+./build.sh ${install_dir}
 #
 # Install python codes
 #
-cd BayesWaveUtils
+pushd BayesWaveUtils
 python setup.py install --prefix ${install_dir}
-cd ${START}
+popd
 #
 # Environment script

--- a/src/BayesWaveIO.c
+++ b/src/BayesWaveIO.c
@@ -19,6 +19,7 @@
 #include <fftw3.h>
+#include "version.h"
 #include "BayesLine.h"
 #include "BayesWave.h"
 #include "BayesWaveIO.h"
@@ -817,7 +818,7 @@ void print_version(FILE *fptr)
  fprintf(fptr, "  Git version: %s\n", GIT_VER);
  fprintf(fptr, "  Git commit: %s\n", GIT_HASH);
  fprintf(fptr, "  Git commit author: %s\n",GIT_AUTHOR);
-  fprintf(fptr, "  Git commit date: %s\n",GIT_DATE);
+  fprintf(fptr, "  Git commit date: %s\n", GIT_DATE);
 }
 void print_run_flags(FILE *fptr, struct Data *data, struct Prior *prior)
 {

--- a/src/CMakeLists.txt
+++ b/src/CMakeLists.txt
+# -- C library --------------
+# library version | the rules for shared library version are complicated,
+#                   the only very important thing is that if the ABI
+#                   changes in a backwards-incompatible way, you should
+#                   increment the MAJOR version number (and probably reset
+#                   the others)
+set(BAYESWAVE_VERSION_MAJOR 1)
+set(BAYESWAVE_VERSION_MINOR 0)
+set(BAYESWAVE_VERSION_PATCH 3)
+set(BAYESWAVE_VERSION_STRING
+    ${BAYESWAVE_VERSION_MAJOR}.${BAYESWAVE_VERSION_MINOR}.${BAYESWAVE_VERSION_PATCH})
+# find headers
+pkg_check_modules(GSL REQUIRED "gsl")
+pkg_check_modules(FFTW REQUIRED "fftw3")
+pkg_check_modules(fftw3f REQUIRED "fftw3f")
+pkg_check_modules(LIBFRAME REQUIRED "libframe")
+pkg_check_modules(LIBMETAIO REQUIRED "libmetaio")
+pkg_check_modules(LAL REQUIRED "lal")
+pkg_check_modules(LALSUPPORT REQUIRED "lalsupport")
+pkg_check_modules(LALFRAME REQUIRED "lalframe")
+pkg_check_modules(LALINFERENCE REQUIRED "lalinference")
+pkg_check_modules(LALINSPIRAL REQUIRED "lalinspiral") # REALLY?
+pkg_check_modules(LALMETAIO REQUIRED "lalmetaio")
+pkg_check_modules(LALSIMULATION REQUIRED "lalsimulation")
+# -- VCS info --------
+execute_process(COMMAND
+    "${GIT_EXECUTABLE}" config --get remote.origin.url
+    WORKING_DIRECTORY "${CMAKE_SOURCE_DIR}"
+    OUTPUT_VARIABLE GIT_URL
+    ERROR_QUIET OUTPUT_STRIP_TRAILING_WHITESPACE)
+message(STATUS "GIT_URL is ${GIT_URL}")
+execute_process(COMMAND
+    "${GIT_EXECUTABLE}" describe --dirty --always --tags
+    WORKING_DIRECTORY "${CMAKE_SOURCE_DIR}"
+    OUTPUT_VARIABLE GIT_VER
+    ERROR_QUIET OUTPUT_STRIP_TRAILING_WHITESPACE)
+message(STATUS "GIT_VER is ${GIT_VER}")
+execute_process(COMMAND
+    "${GIT_EXECUTABLE}" log -1 --format=%H
+    WORKING_DIRECTORY "${CMAKE_SOURCE_DIR}"
+    OUTPUT_VARIABLE GIT_HASH
+    ERROR_QUIET OUTPUT_STRIP_TRAILING_WHITESPACE)
+message(STATUS "GIT_HASH is ${GIT_HASH}")
+execute_process(COMMAND
+    "${GIT_EXECUTABLE}" log -1 --format=%ae
+    WORKING_DIRECTORY "${CMAKE_SOURCE_DIR}"
+    OUTPUT_VARIABLE GIT_AUTHOR
+    ERROR_QUIET OUTPUT_STRIP_TRAILING_WHITESPACE)
+message(STATUS "GIT_AUTHOR is ${GIT_AUTHOR}")
+execute_process(COMMAND
+    "${GIT_EXECUTABLE}" log -1 --format=%ad
+    WORKING_DIRECTORY "${CMAKE_SOURCE_DIR}"
+    OUTPUT_VARIABLE GIT_DATE
+    ERROR_QUIET OUTPUT_STRIP_TRAILING_WHITESPACE)
+message(STATUS "GIT_DATE is ${GIT_DATE}")
+configure_file(${CMAKE_CURRENT_SOURCE_DIR}/version.h.in
+    ${CMAKE_CURRENT_SOURCE_DIR}/version.h @ONLY)
+# define library
+set(
+    BAYESWAVE_HEADERS
+    version.h
+    BayesLine.h
+    BayesWave.h
+    BayesWaveEvidence.h
+    BayesWaveIO.h
+    BayesWaveLikelihood.h
+    BayesWaveMCMC.h
+    BayesWaveMath.h
+    BayesWaveModel.h
+    BayesWavePrior.h
+    BayesWaveProposal.h
+    BayesWaveWavelet.h
+)
+add_library(
+    libbayeswave SHARED
+    BayesLine.c
+    BayesWaveIO.c
+    BayesWaveMath.c
+    BayesWaveModel.c
+    BayesWaveWavelet.c
+    BayesWavePrior.c
+    BayesWaveLikelihood.c
+    BayesWaveProposal.c
+    BayesWaveEvidence.c
+    BayesWaveMCMC.c
+)
+target_include_directories(libbayeswave PRIVATE
+    ${GSL_INCLUDE_DIRS}
+    ${FFTW_INCLUDE_DIRS}
+    ${FFTW3F_INCLUDE_DIRS}
+    ${LIBFRAME_INCLUDE_DIRS}
+    ${LIBMETAIO_INCLUDE_DIRS}
+    ${LAL_INCLUDE_DIRS}
+    ${LALSUPPORT_INCLUDE_DIRS}
+    ${LALFRAME_INCLUDE_DIRS}
+    ${LALINFERENCE_INCLUDE_DIRS}
+    ${LALINSPIRAL_INCLUDE_DIRS}
+    ${LALMETAIO_INCLUDE_DIRS}
+    ${LALSIMULATION_INCLUDE_DIRS}
+    )
+target_link_libraries(libbayeswave
+    m
+    gsl
+    fftw3
+    fftw3f
+    Frame
+    lal
+    lalsupport
+    lalframe
+    lalinference
+    lalinspiral
+    lalmetaio
+    lalsimulation
+    )
+set_target_properties(
+    libbayeswave PROPERTIES
+    OUTPUT_NAME bayeswave
+    VERSION ${BAYESWAVE_VERSION_STRING}
+    SOVERSION ${BAYESWAVE_VERSION_MAJOR}
+    PUBLIC_HEADER "${BAYESWAVE_HEADERS}"
+)
+set_property(TARGET libbayeswave PROPERTY C_STANDARD 11)
+# install
+install(
+    TARGETS libbayeswave
+    RUNTIME DESTINATION ${CMAKE_INSTALL_LIBDIR}
+    LIBRARY DESTINATION ${CMAKE_INSTALL_LIBDIR}
+    ARCHIVE DESTINATION ${CMAKE_INSTALL_LIBDIR}
+    PUBLIC_HEADER DESTINATION ${CMAKE_INSTALL_INCLUDEDIR}
+)
+# -- executables --------
+add_executable(BayesWave BayesWave.c)
+target_link_libraries(BayesWave libbayeswave)
+set_property(TARGET BayesWave PROPERTY C_STANDARD 11)
+add_executable(BayesWavePost BayesWavePost.c)
+target_link_libraries(BayesWavePost libbayeswave)
+set_property(TARGET BayesWavePost PROPERTY C_STANDARD 11)
+add_executable(BayesWaveCleanFrame BayesWaveCleanFrame.c)
+target_link_libraries(BayesWaveCleanFrame libbayeswave)
+set_property(TARGET BayesWaveCleanFrame PROPERTY C_STANDARD 11)
+add_executable(BayesWaveToLALPSD BayesWaveToLALPSD.c)
+target_link_libraries(BayesWaveToLALPSD libbayeswave)
+set_property(TARGET BayesWaveToLALPSD PROPERTY C_STANDARD 11)
+install(
+    TARGETS
+    BayesWave
+    BayesWavePost
+    BayesWaveCleanFrame
+    BayesWaveToLALPSD
+    DESTINATION ${CMAKE_INSTALL_BINDIR}
+)
+# -- pkgconfig --------------
+# install pkgconfig file
+configure_file(
+    "${CMAKE_CURRENT_SOURCE_DIR}/${PROJECT_NAME}.pc.in"
+    "${CMAKE_CURRENT_BINARY_DIR}/${PROJECT_NAME}.pc"
+    @ONLY
+)
+install(
+    FILES ${CMAKE_CURRENT_BINARY_DIR}/${PROJECT_NAME}.pc
+    DESTINATION ${CMAKE_INSTALL_LIBDIR}/pkgconfig
+)
--- a/src/bayeswave.pc.in
+++ b/src/bayeswave.pc.in
+prefix=@CMAKE_INSTALL_PREFIX@
+exec_prefix=${prefix}
+libdir=${prefix}/lib
+includedir=${prefix}/include
+Name: @PROJECT_NAME@
+Description: @PROJECT_DESCRIPTION@
+Version: @PROJECT_VERSION@
+Libs: -L${libdir} -llibbayeswave
+Libs.private: -L${libdir} -lgsl -lfftw3 -lfftwf -lFrame -llal -llalsupport -llalframe -llalinference -llalinspiral -llalmetaio -llalsimulation
+Cflags: -I${includedir}
--- a/src/version.h.in
+++ b/src/version.h.in
+/* Git VCS info 
+ * Define macros for substitution by cmake.  Macros used in BayesWaveIO.c.
+ *  Copyright (C) 2019 James A. Clark <james.clark@ligo.org>
+ */
+#define GIT_URL "@GIT_URL@"
+#define GIT_VER "@GIT_VER@"
+#define GIT_HASH "@GIT_HASH@"
+#define GIT_AUTHOR "@GIT_AUTHOR@"
+#define GIT_DATE "@GIT_DATE@"