Switch to using .size instead of len

See merge request !951

Resolve "Sample from the prior test failing due to timeout"

Closes #565

See merge request !950

Add MCMC combine method and improve shuffle behaviour when combining results

See merge request lscsoft/bilby!945

Gregory Ashton authored 3 years ago and Moritz Huebner committed 3 years ago

Note: this will change the default behaviour when combining both MCMC
and nested samples. Instead of shuffling the results together, they will
be unshuffled enabling converge checks of the individual chains.
- Add option to shuffle posteriors when combining (default to false)
- Add mcmc sample combine

Increase the default dynesty checkpoint time to 30 minutes

See merge request !940

Add exists_ok to mkdir

See merge request !946

Gregory Ashton authored 3 years ago and Moritz Huebner committed 3 years ago

Cherry picked results from !905:
- Add the exist_ok=True flag to mkdirs resolving errors caused when the
directory is created before it is written (common on large-scale HTC
runs).

Make tables an optional requirement

Closes #561

See merge request !930

HDF5: Fix loading meta data, booleans, string lists

See merge request lscsoft/bilby!941

Improvements to the core prior class

See merge request !944

Gregory Ashton authored 3 years ago and Moritz Huebner committed 3 years ago

Cherry picked results from !905:
- Add ignore errstate to avoid warning messages
- Add helper properties for the width, non_fixed_keys, fixed_keys, and constraint_keys
- Add constraints to the ConditionalPrior

Suppress the error message when creating injections

See merge request !938

Encapsulate GMST method in gw.utils

See merge request !947

Gregory Ashton authored 3 years ago and Moritz Huebner committed 3 years ago

Cherry picked from !905
- Encapsulate all calls to lal.GreenwichMeanSiderealTime in a function
- Add explicit conversion to a float to capture 1D arrays

Improvements to bilby.gw

See merge request !948

Gregory Ashton authored 3 years ago and Moritz Huebner committed 3 years ago

Cherry picked from !905
- Add parameter sets to the source file
- Add parameter properties to the CBC prior files (e.g. prior.tidal)
- Suppress errstate warnings in the prior and likelihood
- Fix bug in rescale for 1D objects

Resolve "Unclear Error Message if module other than bilby is specified"

Closes #487

See merge request lscsoft/bilby!935

Reduce time required for the sampler tests

See merge request !949

Remove deprecated functions/classes

See merge request lscsoft/bilby!936

Remove pin on the numpy version

Closes #555

See merge request !934

bilby/gw/likelihood.py: speed up ROQ weight calculation with IFFT

See merge request !903

Reduce imports

Closes #558

See merge request !933

Add requirements to MANIFEST

See merge request !929

Version 1.1.0 release

See merge request !928

Fix MultiNest periodic keys

See merge request !927