Generalise the consistency checks

See merge request lscsoft/bilby!521

Gregory Ashton authored 5 years ago and Colm Talbot committed 5 years ago

There is good reason to create a results list and check the consistency
without it being for combining results (e.g., for a PP test). This makes
the error messages more applicable in these situations.

Resolve sampling_time persistence between restarts for dynesty

Closes #378

See merge request lscsoft/bilby!519

Gregory Ashton authored 5 years ago and Moritz Huebner committed 5 years ago

This stores the sampling time in the resume file for dynesty and loads
it allowing the sampling time for jobs which get restarted to reflect
the total sampling time. Also defines the general mechanism for any
other samper to act similarly.

Add catch for empty log_evidence_err array

See merge request lscsoft/bilby!511

Load data by channel name example

See merge request lscsoft/bilby!524

Improve prior reading

See merge request lscsoft/bilby!501

Adding counter to likelihood

See merge request !406

Rhys Green authored 5 years ago and Moritz Huebner committed 5 years ago

replacing self.count with result.num counter, this makes the code cleaner as only a few extra line sof codee needed

Resolve "Interference of bilby command line args"

Closes #379

See merge request !518

Add a catch for broken resume files

See merge request !517

If the dynesty pickle file is broken, it will print a warning that the
reading of the resume file and otherwise continue as if the resume file
didn't exist

Improvements to the PP plot

See merge request !516

1) Add axes labels
2) Add individual p values to the legend
3) Use latex labels

Remove dynesty from __getstate__

See merge request !513

Add method to get data by channel name

See merge request !507

Move optimal_snr_squared_array calculation from inner to outer loop

See merge request !514

Modify inject signal

See merge request !508

Fix bug in naming convention for waveform_approximant

See merge request !509

Resolve "pymc3 failing C.I. tests"

Closes #376

See merge request !510

Removes the live_plot kwarg which seems to be causing the C.I testing to
fail

make frequency mask caching work

See merge request !506

allow precessing BNS

See merge request !491

add function to make waveform plot

See merge request !484

Generalise ROQ

See merge request !490