Gregory Ashton authored 1 year ago and Colm Talbot committed 1 year ago

bilby/gw/detector/calibration.py: optimize spline interpolation of calibration uncertainties

See merge request !1241

(cherry picked from commit f601ba08)

0474f80e bilby/gw/detector/calibration.py: optimize spline interpolation of calibration uncertainties

BUGFIX: make sure nested samples are data frame

See merge request !1244

(cherry picked from commit ba21731f)

49f839b5 BUGFIX: make sure nested samples are data frame

Christopher Philip Luke Berry authored 1 year ago and Colm Talbot committed 1 year ago

Minor clean up to the results methods

See merge request !1243

(cherry picked from commit 9176b74b)

46bf363c Minor clean up to the results methods
b783b4be Add read_in_result and read_in_result_list to the top level

Gregory Ashton authored 1 year ago and Colm Talbot committed 1 year ago

BUGFIX: make logger disabling work in redundancy test

See merge request !1245

(cherry picked from commit b8e21c23)

43433558 BUGFIX: make logger disabling work in redundancy test

Gregory Ashton authored 1 year ago and Colm Talbot committed 1 year ago

Update LIGO India coordinates reference to public version on DCC

See merge request !1246

(cherry picked from commit 2a7d21c1)

75fce6d9 Update A1.interferometer
6f6d1ec6 Merge branch 'master' of git.ligo.org:aditya.vijaykumar/bilby
d50ef1bf Merge branch 'master' of git.ligo.org:lscsoft/bilby into LI

Gregory Ashton authored 1 year ago and Colm Talbot committed 1 year ago

Print fewer info statements when setting strain data

See merge request !1233

(cherry picked from commit 2140bcea)

d7039e3b Print fewer info statements when setting strain data
bc15e3b0 Reformat strain_data.py to satisfy pre-commit
a73b555c Revert "Reformat strain_data.py to satisfy pre-commit"
3c616a8d Fix only the debug indentation warning

Gregory Ashton authored 1 year ago and Colm Talbot committed 1 year ago

Resolve issue with cached result classes

See merge request !1223

(cherry picked from commit 0817696c)

7b507091 Resolve issue with cached result classes
4cf8cb47 Apply default for backward compatibility
db76ad9d Add test case from Andrew
373e2a3c Merge branch 'master' into results-class-cache-fix

Gregory Ashton authored 1 year ago and Colm Talbot committed 1 year ago

Bugfix Slabspike Sampling

See merge request !1235

(cherry picked from commit c07e51d4)

304b0cff Fix slabspike so that if sample is passed without a size argument it returns...
81f5de90 Used a more pythonic solution
3e7f6b74 Remove dangerous assertion, type on numbers.Number, use a try except block, apply to more functions

Version 2.0.2 release

See merge request !1239

(cherry picked from commit 4f9c778f)

7fa26b3d Version 2.0.2 release

Merge branch '676-some-mcmc-proposals-with-non-trivial-boundaries-breaks-detailed-balance' into 'master'

Resolve "Some MCMC proposals with non-trivial boundaries breaks detailed balance"

Closes #676

See merge request !1237

(cherry picked from commit a3cc61db)

0b5064bb Only apply boundary if the log factor is zero

Gregory Ashton authored 2 years ago and Colm Talbot committed 2 years ago

Ignore conversion warning

See merge request !1238

(cherry picked from commit 25c234a8)

d6203345 Ignore conversion warning

Gregory Ashton authored 2 years ago and Colm Talbot committed 2 years ago

Time calibration

See merge request !1234

(cherry picked from commit c76fcdf2)

46f1403d Allow de-marginalisation of calibration along with time
c30494b1 Parallelise the reweighting step
5396136e Remove unused import
9f665cb0 Remove print statement
8b066f78 Add handling of numpy wide unicode when writing h5
1d92131c Ad the progress bar back in when computing LogLs
d0aa5eed Fix flake errors and array error
fe1b075d flake changes
9ffae96d Fix casting to np.array
e1430e4c flake8
2061de43 Cleanup code to use sample in loop
279ddcf2 DEV: neaten calibration marginalization to enable reconstruction
ca4b03f1 Merge branch 'time-calibration' into 'time-calibration-reconstruction'
88c52d2a BUGFIX: add case of just time and calibration marginalzation
ec10acda Merge branch 'time-calibration-reconstruction' into 'time-calibration'
411cf645 Add john-veitch as special case author name
438e705d Fix authorlist check

DEV: add nessai sampling time

See merge request !1236

(cherry picked from commit 357c5c2a)

8061c85a DEV: add nessai sampling time

Version 2.0.1

See merge request lscsoft/bilby!1231

(cherry picked from commit 507d93c8)

825232bb Version 2.0.1
52698a54 TYPO: typo fix in changelog
d009edf0 Fix typo

Add sklearn

See merge request lscsoft/bilby!1230

(cherry picked from commit 0d22e1a8)

eaa6a40f Add sklearn
cc2f9742 Update scikit-learn to the correct name

TEST: add test run unit test

See merge request lscsoft/bilby!1224

(cherry picked from commit 5939612a)

28d00120 TEST: add test run unit test
67cc263c TEST: fix dummy likelihood
7cf9da71 TEST: make sure run test returns valid values

BUGFIX: fix act-walk caching

See merge request !1225

(cherry picked from commit e019b5a2)

78a23a7a BUGFIX: fix act-walk caching
3bd9e531 FORMAT: fix formatting issues
76e813ee BUGFIX: typo in _cache attribute
06985f91 BGUFIX: track act for rwalk method
dff3a72c TYPO: add missing blank line
f6017840 TEST: bugfix in dynesty test

Address memory issue with compute SNRs

See merge request lscsoft/bilby!1227

(cherry picked from commit 8268a0c6)

67c02836 Address memory issue with compute SNRs
cbc6bf5a Avoid calculating arrays if not needed and add documentation
98c344e4 DEV: add return_array option to other likelihood classes
cd5c1f77 Add return_array for roq method
55a52125 Merge remote-tracking branch 'origin/return-array-other-likelihoods' into...

Resolve "Pipeline failures due to constant changes in lalsuite"

Closes #674

See merge request lscsoft/bilby!1229

(cherry picked from commit 655917e7)

ebb81b02 Update Msun to match LALSuite
710b245d Skip GWOSC test

Version 2.0.0 release

See merge request lscsoft/bilby!1220

BUGFIX: make sure chain tracks all points

See merge request !1222

DOCS: add links to actual code in docs

See merge request lscsoft/bilby!1221

DEV: update custom dynesty proposals

See merge request !1187

Single waveform call in ROQ for ~35% faster likelihood evaluation

See merge request lscsoft/bilby!1216

FEAT: Precomputed calibration model

See merge request !1215

- bilby/gw/likelihood/roq.py: set up unique frequency nodes and inverse indexes at the initial stage
- bilby/gw/source.py: roq waveform generator to allow unique frequency nodes and inverse indexes

BUGFIX: fix time+calibration marginalization

See merge request !1201

FEATURE: Resolve "Implement ROQ time-marginalization reconstruction"

Closes #667 and #663

See merge request !1196

MAINT: Fix docs job

See merge request !1217